Table 5.
The types of AS events in ovaries of Xiang pig with small and large litter size
| EventType | NumEvents.JC.only | SigEvents.JC.only | up | down | NumEvents.JC + ROT | SigEvents. JC + ROT | up | down |
|---|---|---|---|---|---|---|---|---|
| SE | 49,441 | 1353 | 643 | 710 | 49,634 | 2325 | 1723 | 602 |
| MXE | 11,177 | 3386 | 1749 | 1637 | 11,198 | 6160 | 3201 | 2959 |
| A5SS | 622 | 169 | 155 | 14 | 624 | 202 | 191 | 11 |
| A3SS | 837 | 152 | 138 | 14 | 837 | 184 | 173 | 11 |
| RI | 1760 | 1077 | 1076 | 1 | 1782 | 1116 | 1115 | 1 |
| Total | 63,837 | 6137 | 3761 | 2376 | 64,075 | 9987 | 6403 | 3584 |
Notes: NumEvents.JC.only: total number of events detected using Junction Counts only. SigEvents.JC.only: number of significant events detected using Junction Counts only. NumEvents .JC + ROT (ReadsOnTarget): total number of events detected using both Junction Counts and reads on target. SigEvents. JC + ROT (ReadsOnTarget): number of significant events detected using both Junction Counts and reads on target