TABLE 1.
Primer | Sequencea
|
Size (nt) | |
---|---|---|---|
Upstream | Downstream | ||
Modified TSb | |||
nTS-CTT | 5′-AATCCGTCGAGCAGACTT-3′ | -------Telomerase extension------→ | 18 |
nCX | ←-----PCR amplification----- | 3′-AATCCGTATCCGTATCCGTATCCG-5′ | 24 |
Telomere addition site | |||
me8-TTA | 5′-TTTGGTTATTTTATCTAAATTTTA-3′ | 24 | |
TCP-23 | 3′-GAATCCGAATCCTTAAGCTATAG-5′ | 23 | |
Terminal telomeric permutations of nTS | |||
nTS-GCT | 5′-AATCCGTCGAGCAGAGCT-3′ | 18 | |
nTS-CTT | 5′-AATCCGTCGAGCAGACTT-3′ | 18 | |
nTS-TTA | 5′-AATCCGTCGAGCAGATTA-3′ | 18 | |
nTS-TAG | 5′-AATCCGTCGAGCAGATAG-3′ | 18 | |
TCP-CC | 3′-CCGAATGCTCTGCTTAAGCTATAG-5′ | 24 |
Upstream primers (i.e., telomerase substrate) are shown in the 5′-to-3′ orientation, and their 3′-terminal telomeric nucleotides are boldfaced. Downstream primers are shown in the 3′-to-5′ orientation, and those of their nucleotides that are complementary to the sequence synthesized by telomerase are boldfaced. The 3′-terminal bases of the upstream primers that may induce primer dimer formation with the downstream primers are underlined (see the text).
TS, telomerase substrate.