Table 4.
Copy number variations detection results.
Level | CNV | Type | Chr | Size | CopyRatio | Cytoband | Aneuploidy | Gene |
---|---|---|---|---|---|---|---|---|
Polymorphism | chr1:668342–672153_dup | Duplication | chr1 | 3.81Kb | 2.72 | p36.33 | – | |
Polymorphism | chr1:879059–899623_dup | Duplication | chr1 | 20.57Kb | 1.16 | p36.33 | – | SAMD11, NOC2L, KLHL17 |
Polymorphism | chr1:1221280–1249356_dup | Duplication | chr1 | 28.08Kb | 1.14 | p36.33 | – | SCNN1D, ACAP3, PUSL1, INTS11 |
Polymorphism | chr1:1396089–1451457_dup | Duplication | chr1 | 55.37Kb | 1.12 | p36.33 | – | ATAD3C, ATAD3B, ATAD3A |
Polymorphism | chr6:29910345–29913411_dup | Duplication | chr6 | 3.07Kb | 1.25 | p22.1 | – | HLA-A |
VUS | chr9:139396643–139581860_dup | Duplication | chr9 | 0.19Mb | 1.16 | q34.3 | – | NOTCH1, EGFL7, AGPAT2 |
Polymorphism | chr11:1031548–1090952_dup | Duplication | chr11 | 59.41Kb | 1.17 | p15.5 | – | MUC6, LOC101927503, MUC2 |
Polymorphism | chr12:132391306–132401133_dup | Duplication | chr12 | 9.83Kb | 1.12 | q24.33 | – | ULK1 |
Polymorphism | chr14:105408841–105419660_dup | Duplication | chr14 | 10.82Kb | 1.1 | q32.33 | – | AHNAK2 |
Polymorphism | chr14:106054389–106208551_dup | Duplication | chr14 | 0.15Mb | 1.39 | q32.33 | – | |
VUS | chr19:4510405–4513806_dup | Duplication | chr19 | 3.40Kb | 1.14 | p13.3 | – | PLIN4 |
Polymorphism | chr22:18020069–18102275_dup | Duplication | chr22 | 82.21Kb | 1.52 | q11.21 | – | CECR2, LOC101929372, SLC25A18, ATP6V1E1 |
Polymorphism | chr22:25713983–25961264_dup | Duplication | chr22 | 0.25Mb | 1.42 | q11.23-q12.1 | – | LRP5L, GRK3 |
VUS | chr1:152595355–152785061_del | Deletion | chr1 | 0.19Mb | 0.88 | q21.3 | – | LCE3A, LCE2D, LCE2C, LCE2B, LCE2A, LCE4A, C1orf68, KPRP, LCE1F, LCE1E, LCE1D, LCE1C, LCE1B |
Polymorphism | chr5:180376224–180429913_del | Deletion | chr5 | 53.69Kb | 0 | q35.3 | – | BTNL8, BTNL3 |
Polymorphism | chr10:124343759–124351967_del | Deletion | chr10 | 8.21Kb | 0.51 | q26.13 | – | DMBT1 |
Polymorphism | chr11:55370904–55406945_del | Deletion | chr11 | 36.04Kb | 0 | q11 | – | OR4C11, OR4P4 |
Polymorphism | chr12:9455172–9464465_del | Deletion | chr12 | 9.29Kb | 0.82 | p13.31 | – | |
Polymorphism | chr12:52840964–52909065_del | Deletion | chr12 | 68.10Kb | 0.92 | q13.13 | – | KRT6B, KRT6C, KRT6A, KRT5 |