TABLE 3.
Rank | Name | genome accesion number | ANI% | AAI% | dDDH | Intergenomic distance | Difference G + C (%) | TETRA |
1 | Pseudomonas qingdaonensis’ JJ3(T) | PHTD00000000.1 | 99.2 | 95.0 | 93.4 | 0.0855 | 0.14 | 0.9998 |
2 | Pseudomonas brassicae MAFF 212427(T) | LC514391.1 | 88.3 | 84.5 | 35.4 | 0.1167 | 0.65 | 0.9880 |
3 | Pseudomonas laurentiana JCM 32154(T) | JAAHBT000000000.1 | 81.6 | 81.0 | 25.1 | 0.1732 | 4.35 | 0.8680 |
4 | Pseudomonas japonica NBRC 103040(T) | NZ BBIR00000000.1 | 83.6 | 78.0 | 26.7 | 0.1618 | 0.10 | 0.9600 |
5 | Pseudomonas alkylphenolica KL28(T) | NZ CP009048.1 | 83.4 | 80.0 | 27.1 | 0.1597 | 3.43 | 0.9384 |
6 | Pseudomonas graminis DSM 11363(T) | NZ FOHW00000000.1 | 77.9 | 72.5 | 22.5 | 0.1951 | 3.8 | 0.9040 |
7 | Pseudomonas donghuensis HYS(T) | NZ AJJP00000000.1 | 84.2 | 78.0 | 27.7 | 0.1554 | 1.64 | 0.9699 |
8 | Pseudomonas sichuanensis WCHPs060039(T) | NZ QKVM00000000.1 | 82.0 | 76.8 | 25.3 | 0.1716 | 0.29 | 0.9840 |
9 | Pseudomonas rhizosphaerae DSM 16299 (T) | CP009533.1 | 79.7 | 72.6 | 23.5 | 0.1859 | 2.06 | 0.9550 |
10 | Pseudomonas wadenswilerensis CCOS 864(T) | NZ UIDD00000000.1 | 84.1 | 78.8 | 27.7 | 0.1556 | 1.67 | 0.9680 |
11 | Pseudomonas plecoglossicida NBRC 103162(T) | NZ BBIV00000000.1 | 81.9 | 74.9 | 25.1 | 0.1732 | 1.26 | 0.9820 |
12 | Pseudomonas vranovensis CCM 7279(T) | NZ AUED00000000.1 | 83.3 | 81.1 | 26.6 | 0.1630 | 2.53 | 0.9610 |
13 | Pseudomonas asiatica RYU5(T) | NZ BUF01000001.1 | 81.9 | 77.0 | 25.3 | 0.1718 | 1.24 | 0.9760 |
14 | Pseudomonas taiwanensis BCRC 17751(T) | NZ AUEC00000000.1 | 81.0 | 77.9 | 24,00 | 0.1823 | 2.19 | 0.9610 |
15 | Pseudomonas putida NBRC 14164(T) | NC 021505.1 | 81.4 | 76.3 | 25,00 | 0.1745 | 1.72 | 0.9700 |
16 | Pseudomonas inefficax JV551A3(T) | OPYN00000000.1 | 81.8 | 75.8 | 25.5 | 0.1706 | 1.21 | 0.9718 |
17 | Pseudomonas monteilii NBRC 103158(T) | NZ BBIS00000000.1 | 81.5 | 77.1 | 24.7 | 0.1768 | 2.37 | 0.9670 |
18 | Pseudomonas coleopterorum LMG 28558(T) | FNTZ00000000.1 | 79.6 | 74.3 | 23.4 | 0.1866 | 2.17 | 0.9542 |
19 | Pseudomonas reidholzensis CCOS 865(T) | UNOZ00000000 | 82.1 | 76.2 | 25,00 | 0.1741 | 0.03 | 0.9700 |
20 | Pseudomonas cremoricolorata 1AM 1541(T) | NZ AUEA00000000.1 | 80.7 | 73.9 | 23.6 | 0.1856 | 0.55 | 0.9531 |
21 | Pseudomonas mosselii CIP 105259(T) | NZ MRVJ00000000.1 | 82.3 | 77.4 | 25.4 | 0.1715 | 0.38 | 0.9810 |
22 | Pseudomonas moorei DSM 12647(T) | NZ FNKJ01000003.1 | 79.4 | 72.8 | 23.6 | 0.1850 | 4.40 | 0.9120 |
23 | Pseudomonas lutea DSM 17257(T) | JRMB00000000.1 | 77.4 | 74.4 | 22.5 | 0.1946 | 3.91 | 0.8920 |
24 | Pseudomonas baetica a390(T) | PKLC00000000.1 | 78.8 | 73.4 | 22.9 | 0.1916 | 5.30 | 0.8681 |
For each genome, its length [in base pairs (bp)], number of annotated genes, and the values of ANI, AAI, dDDH, intergenomic distance, G + C difference, and TETRA index estimated in the comparison with the genome of Pseudomonas BBB001T. In column 1, the genome accession number is indicated after the species name in RefSeq.