Table 3.
The Selected Subsets of 20 Genes Using Two Feature Selection Methods and the Result of Genes’ Clustering by DBscan Method
| The selected genes using pearson correlation coefficient (subset 1)* | The selected genes using pearson correlation coefficient (subset 2)* | The selected genes using Laplacian score |
Genes’ clustering using Hierarchical method |
||
|---|---|---|---|---|---|
| Cluster 1 | Cluster 2 | ||||
| IL-4 | IL-4 | IL-4 | TGF-β1 | IL-4 | BCL-2 |
| IL-23 | IL-10 | FoxP3 | IL-6 | Fas | |
| IL-27 | IL-12b | IFN-γ | IL-10 | FasL | |
| CTLA-4 | IL-17 | BCL-2 | IL-12 | Her2 | |
| TGF-β1 | IL-27 | Oct4 | IL-17 | MDM2 | |
| Fas | CTLA-4 | Survivin | IL-23 | Oct4 | |
| Her2 | TGF-β1 | IL-27 | P53 | ||
| MDM2 | FasL | FoxP3 | SDF1 | ||
| P53 | Her2 | CTLA-4 | Survivin | ||
| Survivin | Oct4 | IFN-γ | |||
| SDF1 | IFN-γ | ||||
* The value 0.85 considered for dividing the correlated genes in two different subsets