Table 3.
RNAseq data of genes with the highest amount of overlapping expression in both regions of the stomach sorted by fold change
| Gene | Gene Name | log2 (Fundus) | log2 (Corpus) | log2 (FC) | q Value |
|---|---|---|---|---|---|
| TTR | Transthyretin | 9.07 | 7.31 | −1.76 | 0.00E + 00 |
| CHIAP2 | Chitinase, acidic pseudogene 2 | 6.88 | 5.17 | −1.71 | 0.00E + 00 |
| CHIA | Chitinase, acidic | 14.41 | 12.81 | −1.61 | 0.00E + 00 |
| SIM2 | Single-minded family BHLH transcription factor 2 | 9.91 | 8.46 | −1.45 | 0.00E + 00 |
| IRX5 | Iroquois homeobox 5 | 7.51 | 6.1 | −1.41 | 0.00E + 00 |
| GC | GC, vitamin D-binding protein | 9.87 | 8.54 | −1.32 | 0.00E + 00 |
| MSLN | Mesothelin | 7.85 | 6.65 | −1.2 | 0.00E + 00 |
| GHRL | Ghrelin and obestatin prepropeptide | 12.62 | 11.51 | −1.11 | 0.00E + 00 |
| TM4SF4 | Transmembrane 4 L six family member 4 | 7.86 | 6.89 | −0.97 | 0.00E + 00 |
| EYA1 | EYA transcriptional coactivator and phosphatase 1 | 5.65 | 4.67 | −0.97 | 2.00E-06 |
| C8orf4 | Chromosome 8 open reading frame 4 | 10.42 | 9.52 | −0.89 | 0.00E + 00 |
| UGT2B15 | UDP glucuronosyltransferase family 2 member B15 | 9.57 | 8.69 | −0.88 | 1.00E-06 |
| PKHD1 | PKHD1, fibrocystin/polyductin | 7.73 | 6.85 | −0.87 | 0.00E + 00 |
| IYD | Iodotyrosine deiodinase | 7.54 | 6.69 | −0.86 | 8.00E-06 |
| FAR2P2 | Fatty acyl-CoA reductase 2 pseudogene 2 | 5.24 | 4.4 | −0.84 | 1.90E-05 |
| ALB | Albumin | 7.83 | 6.99 | −0.84 | 2.80E-04 |
| CRYBA2 | Crystallin β A2 | 4.51 | 3.68 | −0.83 | 3.56E-04 |
| CLDN4 | Claudin 4 | 4.92 | 4.1 | −0.82 | 1.84E-04 |
| VTN | Vitronectin | 5.04 | 4.23 | −0.81 | 4.32E-04 |
| CHGA | Chromogranin A | 12.29 | 11.49 | −0.8 | 4.00E-06 |
| NUPR1L | Nuclear protein, transcriptional regulator, 1-like | 7.18 | 6.4 | −0.79 | 2.00E-06 |
| SERPINA1 | Serpin family A member 1 | 9.59 | 8.8 | −0.79 | 1.24E-04 |
| SST | Somatostatin | 10.42 | 9.64 | −0.78 | 4.32E-04 |
| LGR5 | Leucine-rich repeat-containing G protein-coupled receptor 5 | 5.12 | 4.35 | −0.78 | 9.30E-04 |
| SLC30A8 | Solute carrier family 30 member 8 | 4.62 | 3.84 | −0.78 | 1.09E-03 |
| BHMT | Betaine—homocysteine S-methyltransferase | 6.8 | 6.03 | −0.76 | 0.00E + 00 |
| TNS4 | Tensin 4 | 5.3 | 4.54 | −0.76 | 9.70E-05 |
| EYA2 | EYA transcriptional coactivator and phosphatase 2 | 7.88 | 7.13 | −0.75 | 5.60E-05 |
| TAC1 | Tachykinin precursor 1 | 2.96 | 3.7 | 0.75 | 5.88E-04 |
| MMD | Monocyte to macrophage differentiation associated | 6.56 | 7.31 | 0.76 | 7.90E-05 |
| FABP4 | Fatty acid-binding protein 4 | 8.56 | 9.34 | 0.78 | 3.56E-04 |
| GATA4 | GATA-binding protein 4 | 9.59 | 10.38 | 0.79 | 4.00E-06 |
| THRSP | Thyroid hormone responsive | 3.53 | 4.33 | 0.8 | 4.32E-04 |
| SAA1 | Serum amyloid A1 | 7.17 | 7.98 | 0.81 | 1.70E-05 |
| GUCA2B | Guanylate cyclase activator 2B | 7.15 | 7.96 | 0.81 | 1.45E-04 |
| SIX2 | SIX homeobox 2 | 6.23 | 7.05 | 0.82 | 3.52E-04 |
| TAC3 | Tachykinin 3 | 5.35 | 6.16 | 0.82 | 4.68E-04 |
| ADIPOQ | Adiponectin, C1Q and collagen domain containing | 7.09 | 7.91 | 0.83 | 4.17E-04 |
| CIDEC | Cell death-inducing DFFA-like effector C | 6.08 | 6.92 | 0.84 | 1.19E-04 |
| TUSC5 | Tumor suppressor candidate 5 | 5.21 | 6.05 | 0.84 | 2.71E-04 |
| CPB1 | Carboxypeptidase B1 | 6.29 | 7.13 | 0.84 | 2.82E-04 |
| TNFRSF12A | TNF receptor superfamily member 12 A | 5.57 | 6.42 | 0.85 | 5.60E-05 |
| PLIN1 | Perilipin 1 | 7.47 | 8.33 | 0.86 | 1.08E-04 |
| MUC13 | Mucin 13, cell surface associated | 7.68 | 8.56 | 0.87 | 1.04E-04 |
| MTCL1 | Microtubule cross-linking factor 1 | 7.47 | 8.35 | 0.88 | 6.00E-06 |
| CA12 | Carbonic anhydrase 12 | 8.85 | 9.75 | 0.9 | 6.70E-05 |
| POU6F2-AS1 | POU6F2 antisense RNA 1 | 3.81 | 4.75 | 0.94 | 1.90E-05 |
| CIDEA | Cell death-inducing DFFA-like effector A | 3.32 | 4.31 | 1 | 4.00E-06 |
| AQP4 | Aquaporin 4 | 9.12 | 10.21 | 1.09 | 0.00E + 00 |
| LINC00520 | Long intergenic nonprotein coding RNA 520 | 4.29 | 5.5 | 1.21 | 0.00E + 00 |
A cutoff value of ≥ 0.75 (FC) was used to select these genes. Genes that are bolded were among those validated by qPCR. FC, fold change.