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. 2021 Feb 26;22(5):bbab006. doi: 10.1093/bib/bbab006

Table 1.

Summary information on PGIs and disease–gene associations curated from different data sources

Database Gene/protein Disease Node Interaction Selection/filter
HuRIa 8327 8327 19 082 HuRI
GTRDb 8275 8275 52 569 Promotor (−1000, +1000); more than 8 binding sites per gene
Reactome 5219 5219 29 328
String 13 444 13 444 91 019 Experimentally confirmed with score ≥350
DisGeNET 7635 8431 16 066 67 993 DGA score ≥0.3
Mimminer 2646 2646 9840 Similarity score >0.6
Gene network 18 718 18 718 183 457
Disease–gene network 19 463 10 103 29 566 261 298

aHuRI—Human Reference Interatome

bGTRD—Gene Transcription Regulation Database