Table 5.

Validation of gene prioritization results by MEGASTROKE GWAS

	SNP	Gene	Sig. genes in GWAS
Algorithm	(Sig./total)	(Sig./total)	Median rank	Hits@10%	Hits list
RWR	411/3110	25/200	5251	2/7	ICA1L, SEMA4A
N2V	1139/3027	53/200	4526	1/7	SEMA4A
DIAMOnD	47/2649	3/200	na	0/7
GenePanda	1859/2918	90/200	8544	1/7	ZCCHC14
RWRH	784/2767	45/200	1840	4/7	SH3PXD2A, SEMA4A, ICA1L, ZCCHC14
N2VH	1597/2590	70/200	5979	1/7	SH3PXD2A
IDLP	603/3700	41/200	9318.5	1/7	ZCCHC14
Degree centrality	385/2144	31/200	7697	0/7