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RNA2HLA performance on available RNA-sequencing datasets. Identity threshold has been defined by the maximum F1 score
| Dataset | SRP144583 | SRP090552 | SRP103772 | SRP081020 |
|---|---|---|---|---|
| Length (bp) | 75 | 100 | 51 | 101 |
| Type | Paired | Paired | Single | Single |
| # of samples | 195 | 42 | 53 | 55 |
| P-value | 0.05 | 0.05 | 0.5 | 0.5 |
| Identity threshold (%) | 81.8 | 87 | 77 | 70 |
| Precision | 1 | 1 | 0.95 | 0.99 |
| Recall | 1 | 1 | 1 | 0.85 |
| F1 score | 1 | 1 | 0.97 | 0.91 |
Abbreviations: Type: paired – paired-end; single – single-end.
