Table 3.

Number of chromosomal sites in common in each dataset pair and their statistical consitency in permutation tests.

Feature of dataset 1			Feature of dataset 2					Random permutations features
Cell line 1	Transposon 1	Transposase 1	Cell line 2	Transposon 2	Transposase 2	Window around insertion sites (±) in both datasets	Number of sites observed	Average number of sites expected per chance	Standard deviation	Z score	Probability = H0 was no differences between obs. and exp.
HeLa	Ifp2	PB	HeLa	Ifp2	PB.NLS-1–558	0	1	N.A.	N.A.	N.A.	p<0.001
HeLa	Ifp2	PB	HeLa	Ifp2	PB.NLS-1–558	1000	37	N.A.	N.A.	N.A.	p<0.001
HeLa	Ifp2	PB	HeLa	Ifp2	Mm523-PGBD5	0	83	N.A.	N.A.	N.A.	p<0.001
HeLa	Ifp2	PB	HeLa	Ifp2	Mm523-PGBD5	1000	175	N.A.	N.A.	N.A.	p<0.001
HeLa	Ifp2	PB	G401	Ifp2	Hs524-PGBD5	0	24	N.A.	N.A.	N.A.	p<0.001
HeLa	Ifp2	PB	G401	Ifp2	Hs524-PGBD5	1000	42	N.A.	N.A.	N.A.	p<0.001
HeLa	Ifp2	PB	HEK293	Ifp2	PB	0	21	N.A.	N.A.	N.A.	p<0.001
HeLa	Ifp2	PB	HEK293	Ifp2	PB	1000	471	260.162	17.0215	12.3865	0
HeLa	Ifp2	PB	HCT116	Ifp2	PB	0	238	67.01	8.4329	20.2763	0
HeLa	Ifp2	PB	HCT116	Ifp2	PB	1000	2387	N.A.	N.A.	N.A.	p<0.006
HeLa	Ifp2	PB	CD4+	Ifp2	PB	0	24	N.A.	N.A.	N.A.	p<0.001
HeLa	Ifp2	PB	CD4-	Ifp2	PB	1000	213	97.684	10.2987	11,197	0
HEK293	Ifp2	PB	HCT116	Ifp2	PB	0	391	N.A.	N.A.	N.A.	p<0.001
HEK293	Ifp2	PB	HCT116	Ifp2	PB	1000	6600	5419.484	93.3269	12.0060	0
HEK293	Ifp2	PB	CD4+	Ifp2	PB	0	362	N.A.	N.A.	N.A.	p<0.001
HEK293	Ifp2	PB	CD4+	Ifp2	PB	1000	752	N.A.	N.A.	N.A.	p<0.001
HCT116	Ifp2	PB	CD4+	Ifp2	PB	0	16	81.825	9.0919	17.5073	0
HCT116	Ifp2	PB	CD4+	Ifp2	PB	1000	5235	2213.501	50.9891	59.2576	0
HEK293	Sleeping Beauty	SB	CD4+	Sleeping Beauty	SB	0	3	N.A.	N.A.	N.A.	p>0.083
HEK293	Sleeping Beauty	SB	CD4+	Sleeping Beauty	SB	1000	385	349.967	19.09	1.8350	p=0.034

N.A., not appropriated to use a Z-test as the distribution of the 1000 permutations results did not fulfil normality in a Shapiro-Wilk test. In the most right column is typed in red probabilities supporting that there was no difference at a threshold of 0.01.