Table 2.
HLA protein, position, amino-acid(s) | Freq (%) GWAS1 (N = 772) | Beta GWAS1 | P-value GWAS1 | Q-value GWAS1 |
---|---|---|---|---|
HLA-DRB1, 37, tyrosine and leucine | 33.35 | 0.57 | 4.78 × 10−4 | 0.12 |
HLA-DRB1, 71, arginine | 50.06 | 0.51 | 6.78 × 10−4 | 0.12 |
HLA-DQB1, 26, leucine | 68.8 | − 0.53 | 8.30 × 10−4 | 0.12 |
HLA-DRB1, 67, phenylalanine | 16.65 | 0.68 | 9.80 × 10−4 | 0.12 |
Freq: frequency; Q-value: the q-value gives the expected positive false discovery rate.