Table 1.

Summary of the genes that were identified by at least two of the four methods used F_ST, hapFLK, composite likelihood ratio and run of homozygosity

Chr	Gene ID	Gene symbol	Gene start (bp)	Gene end (bp)	Method
1	ENSGALG00000011274	DCN	44,050,178	44,202,174	F_ST, ROH-L
1	ENSGALG00000012559	LARGE1	52,678,868	52,954,337	F_ST, CLR-L
1	ENSGALG00000016288	IL1RAPL1	117,527,572	11,8143,733	CLR-K, ROH-L-K
2	ENSGALG00000008591	CACNB2	19,119,896	19,343,839	hapFLK, CLR-L
2	ENSGALG00000009509	CALCR	23,060,807	23,197,789	F_ST, CLR-K
2	ENSGALG00000010792	AGMO	27,838,091	28,021,352	F_ST, CLR-L, ROH-L
2	ENSGALG00000010794	MEOX2	28,039,372	28,092,164	F_ST, CLR-L, ROH-L
2	ENSGALG00000010854	HDAC9	29,076,224	29,386,193	F_ST, CLR-L
2	ENSGALG00000013817	SPIRE1	97,073,307	97,195,740	F_ST, CLR-K
3	ENSGALG00000012973	ESR1	49,053,965	49,241,576	CLR-K, ROH-K
4	ENSGALG00000012074	ALPK1	57,133,859	57,167,350	F_ST, ROH-L
5	ENSGALG00000009320	PSEN1	26,593,233	26,614,911	F_ST, CLR-L
8	ENSGALG00000005208	S1PR1	12,067,120	12,071,019	F_ST, ROH-L
20	ENSGALG00000008010	PTPN1	13,537,599	13,576,469	F_ST, CLR-K

Chr: chromosome number