Table 1.
Pentatricopeptide repeat protein (PPR) and mitochondrial transcription termination factor (mTERF) genes in restoration of male-fertility-associated regions identified on 1RS (40–70 Mbp) and 3RL (710–760 Mbp) chromosome in ‘Lo7’ rye (Secale cereale L.) reference genome. Genes expressed in ‘Gülzow’ type hybrid cultivars at flowering are marked as green, and genes not expressed as red.
| Chromosome | Position (Mbp) | Gene Length (bp) | Annotation | Expression | |
|---|---|---|---|---|---|
| cv. Helltop | cv. Stannos | ||||
| 1R | 42.9 | 822 | PPR (P Type) | ||
| 46.2 | 2091 | RFL-PPR (P Type) | |||
| 46.2 | 2613 | RFL-PPR (P Type) | |||
| 46.3 | 2601 | RFL-PPR (P Type) | |||
| 46.9 | 2487 | RFL-PPR (P Type) | |||
| 47.1 | 2490 | RFL-PPR (P Type) | |||
| 47.1 | 1833 | RFL-PPR (P Type) | |||
| 51.9 | 1659 | PPR (P Type) | |||
| 61.1 | 417 | RFL-PPR (P Type) | |||
| 61.3 | 287 | PPR (P Type) | |||
| 61.3 | 213 | PPR (P Type) | |||
| 61.5 | 2499 | RFL-PPR (P Type) | |||
| 61.5 | 1866 | mTERF | |||
| 61.8 | 2472 | RFL-PPR (P Type) | |||
| 61.9 | 2448 | RFL-PPR (P Type) | |||
| 61.9 | 1460 | RFL-PPR (P Type) | |||
| 61.9 | 2451 | RFL-PPR (P Type) | |||
| 62.0 | 2499 | RFL-PPR (P Type) | |||
| 70.8 | 510 | mTERF-like | |||
| 70.8 | 540 | mTERF-like | |||
| 3R | 731.7 | 462 | mTERF | ||
| 733.4 | 1986 | PPR (PLS Type) | |||
| 738.4 | 1743 | PPR (PLS Type) | |||
| 743.7 | 1461 | PPR (PLS Type) | |||
| 751.6 | 1356 | PPR (PLS Type) | |||
| 752.1 | 1548 | PPR (PLS Type) | |||
| 759.7 | 825 | PPR (PLS Type) | |||