| BiFC | Bimolecular fluorescence complementation |
| BioID | Proximity-dependent biotinylation identification |
| BrU | 5-BromoUridine |
| cGAS–STING | Cyclic GMP/AMP Synthase–Stimulator of Interferon Genes |
| CRISPR | Clustered Regularly Interspaced Short Palindromic Repeats |
| Dm | Drosophila melanogaster |
| dsRNA | Double-stranded RNA |
| ETC | Electron transport chain |
| FASTK | Fas-activated serine/threonine kinase |
| G-rich | Guanine-rich |
| G4 | G-quadruplexes |
| GRSF1 | G-rich sequence factor 1 |
| H-strand | Heavy strand |
| IMM | Inner mitochondrial membrane |
| IMS | Intermembrane space |
| L-strand | Light strand |
| LETM1 | Leucine zipper EF-hand-containing transmembrane protein 1 |
| LLPS | Liquid–liquid phase separation |
| LRPPRC | Leucine-rich PPR motif-containing protein |
| MELAS | Mitochondrial Encephylomyopathy, Lactic Acidosis and Stroke-like episodes |
| Mfn2 | Mitochondrial fusion factor Mitofusin 2 |
| MOMP | Mitochondrial outer membrane permeabilization |
| MRGs | Mitochondrial RNA granules |
| mt-DNA | Mitochondrial DNA |
| mt-dsRNA | Mitochondrial double-stranded RNA |
| mt-RNA | Mitochondrial RNA |
| mtLSU | Mitochondrial large ribosomal subunit |
| mtPAP | Poly(A) polymerase |
| OMM | Outer mitochondrial membrane |
| OXPHOS | Oxidative Phosphorylation |
| RBPs | RNA binding proteins |
| RIG-I-MDA5 | Retinoic Acid Inducible Protein I- Melanoma Differentiation Associated Gene 5 |
| RNAi | RNA interference |
| SLIRP | Stemloop interacting RNA-binding protein |
| STED | Stimulated emission depletion |
| TFAM | Transcription factor A, mitochondrial |