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. 2021 Aug 27;13(17):4330. doi: 10.3390/cancers13174330

Table 4.

Studies on clinical utility of exosomal mRNAs, lncRNAs and circRNAs as biomarkers in lung cancer.

Molecule Sample Number of Subjects Isolation Methods Characterization Methods Utility Comments Authors
TP63, KRT5, CEACAM6 and SFTPB mRNAs Serum 54 AC + 16 SCC Ultracentrifugation TEM/NTA/WB Histological classification 17 miRNAs to be analyzed were selected previously from TCGA database as differentially expressed between AC and SCC. ACTB and SLC25A6 were used as internal references Cao et al. [136]
eIF4E RNA Serum 99 NSCLC + 40 C Precipitation TEM/NTA/WB Diagnosis
Prognosis: stage, distant metastases, OS and PFS
eIF4E data extracted from TCGA database Dong et al. [137]
PD-L1 (1) and IFN-γ (1,2) mRNA EDTA Plasma 38 NSCLC Membrane affinity spin columns - (1) Response to treatment
(2) PFS
Quantification by ddPCR with ACTB as internal control Del Re et al. [138]
MALAT-1 Serum 77 NSCLC + 30 C Precipitation TEM/NTA/WB Diagnosis
Prognosis (Lymph node metastasis, TNM stage)
Quantification by RT-PCR. GAPDH was used for normalization Zhang et al. [90]
linc01125 Serum 277 NSCLC + 187 C + 5 P + 59 T + 58 COPD Precipitation - Diagnosis
Prognosis (stage, OS)
RNA-Seq for lncRNA profile and subsequent quantification of linc01125 by RT-PCR with spiked in controls Xian et al. [139]
FECR Serum 35 with limited SCLC and 26 with extensive SCLC +55 C Affinity Chromatography TEM/WB Diagnosis
Prognosis (survival)
Response to chemotherapy
RT-PCR with β-actin as control Li et al. [140]
circ_0014235 and circ_0025580 Plasma 30 SCC + 30 C Precipitation - Diagnosis
Prognosis (TNM stage and tumor size)
circRNA sequencing and confirmation with RT-PCR with GAPDH as internal control Wang et al. [141]
circRNA_0056616 EDTA plasma 90 AC (42 with lymph node metastasis and 48 without) Precipitation TEM/WB Lymph node metastasis predictor RT-PCR. Normalization as Wang’s methods He et al. [142]
circSATB2 Serum 83 NSCLC + 95 C Ultracentrifugation TEM/NTA/WB Diagnosis
Prognosis (metastasis detection)
RT-PCR. GAPDH and U6 were used as internal references and cel-miR-39 as an external reference Zhang et al. [143]
circ_0047921, and circ_0007761 (1)
circ_0056285 (1,2)
Serum Screening set: 30 NSCLC + 45 C
Training set: 120 NSCLC + 165 C
Validation set 1: 62 NSCLC + 95 C
Validation set 2: 63 NSCL + 58 COPD + 46 T
Precipitation TEM/NTA/WB/FC (1) Diagnosis (including early stage)
(2) Prognosis: state of progression and lymph-node metastases
1701 circRNAs initially identified by RNA-seq, 17 of them were differentially expressed and 8 of them were validated by RT-PCR with GAPDH and ACTB as spiked-in controls Xian et al. [144]

Abbreviations: AC: adenocarcinoma; C: controls; circRNA: circular RNA; COPD: chronic obstructive pulmonary disease; ddPCR: droplet digital PCR; EV: extracellular vesicles; FC: flow cytometry; LC: lung cancer; miRNA: microRNA; NSCLC: non-small cell lung cancer; NTA: nanoparticle tracking analysis; OS: overall survival; P: pneumonia; PFS: progression-free survival; RT-PCR: real-time polymerase chain reaction; SCC: squamous carcinoma; SCLC: small cell lung cancer; T: tuberculosis; TCGA: The Cancer Genome Atlas; TEM: transmission electron microscopy; TNM: tumor-node-metastasis; WB: Western blot.