TABLE 2.
Campylobacter capture probes, their sequences, and homologies
| Capture probe | Sequencea | Sequence identity with: | EMBL/GenBank accession no.b |
|---|---|---|---|
| jej/col 1 | tttGCGGTACACTTAATGCGTT | C. jejuni | Z29326, M59074, L04315, L14630 |
| UPTC | L14631 | ||
| jej/col 2 | taaGCTCGGCCGAACCGTTA | C. coli | L04312 |
| C. jejuni | Z29326, M59074, L04315, L14630 | ||
| C. rectus | L06973 | ||
| C. showae | L06974 | ||
| C. curvus | L06976 | ||
| C. gracilis | L04320, L37787 | ||
| col | aaaCCCTGACTAGCAGAGCAA | C. coli | L04312 |
| lar | taaGCTCACCCGAAGTGTTAG | C. lari | L04316, M92310 |
| ups | aaaCTACAGAATTTGTTGGATATC | C. upsaliensis | L14628 |
| ups/hel | taaGCTCGACCGAATCGTTAG | C. helveticus | U03022 |
| C. upsaliensis | L14628 | ||
| hyo | ataCTCTAAGATGTTATTAGGATAT | C. hyointestinalis | M65009, M65010 |
| fet | aaaCTAAGAGATTAGTTGGATATC | C. fetus | M65011, M65012L04314, L14633 |
a
Bases in lowercase letters represent nonhybridizing spacer regions.
b
Species identified only to genus level have not been included.