Table 2. Species and sequence data sampled for phylogenetic analyses.
Data for species in bold were generated in this study. For each species, the number of loci and amino acid residues included in the final concatenated 134 locus alignment are provided. NCBI: National Center for Biotechnology Information; USNM: National Museum of Natural History, Smithsonian Institution; UOGCVC: University of Guam Coral Voucher Collection.
| Taxon | Voucher/Reference | Loci | Residues | NCBI Accession | |
|---|---|---|---|---|---|
| Hydroidolina | |||||
| Capitata | Zancleopsis tentaculata | USNM1622168 | 12 | 1,103 | MW272249–60 |
| Millepora dichotoma | UOGCVC947 | 6 | 726 | MW272119– 24 | |
| Pennaria disticha | USNM1622068 | 47 | 4,403 | MW272261–307 | |
| Filifera I | Myrionema hargitti | USNM1622176 | 22 | 2,005 | MW272227–48 |
| Filifera II | Proboscidactyla sp. | USNM1622170 | 5 | 448 | MW272435–39 |
| Leptothecata | Dynanema crisioides | USNM1622069 | 62 | 6,173 | MW272032–93 |
| Nemalecium lighti | USNM1622067 | 54 | 5,256 | MW272125–78 | |
| Aglaophenia parvula | USNM1621045 | 39 | 3,890 | MW272179–217 | |
| Kirchenpaueria halecioides | USNM1622065 | 25 | 2,548 | MW272094–118 | |
| Kirchenpaueria sp. | USNM1621044 | 84 | 8,018 | MW272308–91 | |
| Octophialucium sp. | USNM1622151 | 40 | 3,334 | MW271992–031 | |
| Clytia hemispherica | Kayal et al. (2018) | 26 | 4,266 | PRJEB32541 | |
| Filifera III | Podocoryne carnea | Kayal et al. (2018) | 109 | 16,709 | SRX529566 |
| Podocoryne martinicana | USNM1622132 | 9 | 1,077 | MW272218–26 | |
| Hydractinia symbiolongicarpus | Kayal et al. (2018) | 104 | 16,411 | SRX474878 | |
| Hydractinia polyclina | Kayal et al. (2018) | 107 | 16,950 | SRR923509 | |
| Filifera IV | Merga violacea | USNM1622162 | 10 | 831 | MW271982–91 |
| Siphonophorae | Athorybia rosacea | USNM1622138 | 6 | 871 | MW272429–34 |
| Agalma elegans | Kayal et al. (2018) | 99 | 15,170 | SRX288285 | |
| Nanomia bijuga | Kayal et al. (2018) | 96 | 14,339 | SRX288430 | |
| Craseoa lathetica | Kayal et al. (2018) | 89 | 13,177 | SRX288432 | |
| Abylobsis tetragona | Kayal et al. (2018) | 95 | 14,370 | SRX288276 | |
| Physalia physalis | Kayal et al. (2018) | 105 | 15,455 | SRX288431 | |
| Aplanulata | Hydra magnipapillata 1 | Kayal et al. (2018) | 94 | 14,171 | SRX000112 |
| Hydra magnipapillata 2 | Chapman et al. (2010) | 105 | 16,187 | PRJNA12876 | |
| Hydra oligactis | Kayal et al. (2018) | 64 | 8,342 | SRR040466–9 | |
| Hydra viridissima | Kayal et al. (2018) | 70 | 9,237 | SRR040470–3 | |
| Ectopleura larynx | Kayal et al. (2018) | 106 | 16,688 | SRX315375 | |
| Outgroup | |||||
| Trachylina | Craspedacusta sowerbii | Kayal et al. (2018) | 116 | 18,413 | SRR923472 |
| Aglaura hemistoma | USNM1622142 | 8 | 925 | MW271974–81 | |
| Solmundaegina nematophora | USNM1284330 | 6 | 324 | MW271968–73 | |
| Aegina citrea | Kayal et al. (2018) | 69 | 9,713 | SAMN03418514 | |
| Cubozoa | Alatina alata | Kayal et al. (2018) | 113 | 17,918 | SAMN03418513 |
| Tripedalia cystophora | Kayal et al. (2018) | 34 | 4,088 | SRR1182852, SRR2103559 | |
| Scyphozoa | Periphylla periphylla | Kayal et al. (2018) | 55 | 6,980 | SRR1915828 |
| Atolla vanhoeffeni | Kayal et al. (2018) | 85 | 12,468 | SAMN03418515 | |
| Chrysaora chesapeakei | USNM1454941 | 37 | 3,145 | MW272392–428 | |
| Cyanea capillata | Kayal et al. (2018) | 37 | 4,503 | SRR1930118 | |
| Stomolophus meleagris | Kayal et al. (2018) | 103 | 15,551 | SRR1168418 | |
| Cassiopea xamachana | Kayal et al. (2018) | 93 | 12,888 | ERX2270394–7, ERX2281610–3 | |
| Aurelia aurita | Brekhman et al. (2015) | 111 | 17,342 | GBRG00000000 | |
| Staurozoa | Haliclystus auricula | USNM1621043 | 17 | 1,406 | MW271951–67 |
| Craterolophus convolvulus | Kayal et al. (2018) | 94 | 12,821 | ERR2248381 | |
| Calvadosia cruxmelitensis | Kayal et al. (2018) | 109 | 16,800 | SRR13003944 | |