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. 2021 Sep 11;21:262. doi: 10.1186/s12911-021-01623-6

Table 6.

Performance characteristics of methods in detection of actionable reports without and with oversampling of positive samples in the training data

Method Use of order information Oversampling AUPRC Average precision AUROC F1 score
LR ( −) ( −) 0.4574 0.4224 0.9351 0.1052
( +) 0.3166 0.3167 0.8036 0.0474
( +) ( −) 0.4218 0.4580 0.8992 0.0763
( +) 0.4214 0.4221 0.9277 0.1089
GBDT ( −) ( −) 0.4813 0.4816 0.8986 0.0975
( +) 0.4854 0.4858 0.9335 0.0841
( +) ( −) 0.4767 0.4771 0.9133 0.0699
( +) 0.4874 0.4878 0.9307 0.0920
LSTM ( −) ( −) 0.4617 0.4620 0.9331 0.0916
( +) 0.4188 0.4194 0.9262 0.0818
( +) ( −) 0.4265 0.4272 0.9277 0.0797
( +) 0.4086 0.4066 0.9255 0.0795
BERT ( −) ( −) 0.5138 0.5142 0.9516 0.1030
( +) 0.4256 0.4273 0.9464 0.1190
( +) ( −) 0.5153 0.5157 0.9497 0.1183
( +) 0.4549 0.4559 0.9441 0.0953

Maximum values for each method are shown in bold