Resource	Reference or source	Identifier or version number
SARS‐CoV‐2 protein sequences
Polyprotein 1a	UniProt	P0DTC1
Polyprotein 1ab	UniProt	P0DTD1
Spike glycoprotein	UniProt	P0DTC2
ORF3a protein	UniProt	P0DTC3
Envelope protein	UniProt	P0DTC4
Matrix glycoprotein	UniProt	P0DTC5
ORF6 protein	UniProt	P0DTC6
ORF7a protein	UniProt	P0DTC7
ORF7b protein	UniProt	P0DTD8
ORF8 protein	UniProt	P0DTC8
Nucleocapsid protein	UniProt	P0DTC9
ORF9b protein	UniProt	P0DTD2
ORF9c protein	UniProt	P0DTD3
ORF10 protein	UniProt	A0A663DJA2
Software
HH‐suite	https://github.com/soedinglab/hh‐suite/releases/tag/v3.3.0	3.3.0 (ac765987bd)
HMMER	http://hmmer.org/	3.3
cath‐resolve‐hits	https://cath‐tools.readthedocs.io/en/latest/	v0.16.2‐0‐ga9f860c
CATH API	https://github.com/UCLOrengoGroup/cath‐api‐docs	4.3
PredictProtein API	https://api.predictprotein.org/v1/results/molart/P0DTC1
SNAP2 API	https://rostlab.org/services/aquaria/snap4aquaria/json.php?uniprotAcc=P0DTC1
PSSH2 tools	https://github.com/aschafu/PSSH2.git
Jolecule	https://jolecule.com/
Aquaria	https://aquaria.ws/
Other
UniRef30	http://wwwuser.gwdg.de/~compbiol/uniclust/2020_03/UniRef30_2020_03_hhsuite.tar.gz	2020_03
PDB	https://ftp.rcsb.org/pub/pdb/data/structures/divided/mmCIF	27 March, 2021
CATH‐Gene3D FunFamsHMM library	ftp://orengoftp.biochem.ucl.ac.uk/cath/releases/all‐releases/v4_3_0	4.3
CATH nr40	ftp://orengoftp.biochem.ucl.ac.uk/cath/releases/all‐releases/v4_3_0	11 September, 2019
PSSH2	https://doi.org/10.5281/zenodo.4279163	27 June, 2020