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. 2021 Aug 31;12:732837. doi: 10.3389/fpls.2021.732837

Table 4.

Quantitative trait loci (QTLs) for SNS identified in multiple environments in the AM population.

QTL Env. Interval (cM) Left marker Right marker LOD PVE (%) Add Physical position (Mb)
QSns.sau-AM-5A





QSns.sau-AM-2B.1

QSns.sau-AM-2B.2








QSns.sau-AM-3B.1



QSns.sau-AM-3B.2 		E1
E3
E4
E7
BLUP
E5
E8
E1
E2
E3
E4
E5
E7
E8
BLUP
E4
E6
E8
E1
E2
E3
E7
BLUP		 116.1–131.9
131.9–135.2
116.1–131.9
116.1–131.9
116.1–131.9
113.7–114.6
113.7–114.6
131.3–132.2
131.3–132.2
131.3–132.2
131.3–132.2
130.0–131.3
130.0–131.3
131.3–132.2
131.3–132.2
22.7–42.5
22.7–42.5
22.7–42.5
48.3–49.7
47.0–48.3
48.3–49.7
47.0–48.3
48.3–49.7		 AX-108790581
AX-111499991
AX-108790581
AX-108790581
AX-108790581
AX-109421413
AX-109421413
KASP-AX-109422178
KASP-AX-109422178
KASP-AX-109422178
KASP-AX-109422178
KASP-AX-95072014
KASP-AX-95072014
KASP-AX-109422178
KASP-AX-109422178
AX-110399975
AX-110399975
AX-110399975
AX-109393346
AX-109876826
AX-109393346
AX-109876826
AX-109393346		 AX-111499991
AX-111596791
AX-111499991
AX-111499991
AX-111499991
AX-109506426
AX-109506426
AX-111588559
AX-111588559
AX-111588559
AX-111588559
KASP-AX-109422178
KASP-AX-109422178
AX-111588559
AX-111588559
AX-109050064
AX-109050064
AX-109050064
AX-110548993
AX-109393346
AX-110548993
AX-109393346
AX-110548993		 5.62
4.01
3.55
8.17
6.61
3.90
3.82
9.02
5.10
11.14
7.35
4.97
21.49
8.87
15.97
6.61
3.97
7.63
4.82
3.86
5.84
14.77
8.64		 12.07
8.27
10.34
9.18
12.09
15.66
7.54
17.99
9.09
26.57
15.79
20.39
25.60
19.32
29.40
17.54
11.85
16.78
9.04
6.71
12.67
15.46
14.27		 −0.95
−0.83
−0.95
−0.85
−0.75
−0.75
−0.63
−1.16
−1.06
−1.48
−1.17
−0.85
−1.41
−1.00
−1.16
1.26
1.02
0.95
0.85
0.94
1.05
1.12
0.83		 557.72–571.41a




710.11–717.87a

731.25–731.60a







25.95–47.17b


65.87–72.59b

Env., environment; BLUP, best linear unbiased prediction; LOD, logarithm of odds; PVE, phenotype variance explained; Add, additive effect.

Positive values: positive alleles from AL, negative values: positive alleles from LM001. Physical positiona: the flanking marker sequences of QTLs which positive alleles detected from LM001 were blasted against wild emmer genome to get physical positions; Physical positionb: those detected from AL were blasted against durum wheat genome to get physical positions.