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. 2021 Sep 8:1–12. doi: 10.1080/07391102.2021.1975569

Table 4.

Binding free energies (kcal/mol) and their components, calculated using MM/PBSA, for the interaction between ACE2 and A- Wild-type spike, B- Spike_N501Y, C- Spike_E484K and D- Spike_South_Africa_triple (K417N + E484K + N501Y).

Complex Van der Waals Energy
(kcal/mol)
Electrostatic Energy
(kcal/mol)
Polar Solvation Energy
(kcal/mol)
SASA Energy
(kcal/mol)
Binding Energy
(kcal/mol)
Wild-type Spike/ACE2 (control) −91.56 ± 0.56 −317.31 ± 1.64 132.47 ± 2.48 −10.75 ± 0.07 −287.25 ± 2.10
Spike_N501Y/ACE2 −96.74 ± 0.70 −324.27 ± 2.00 123.98 ± 3.01 −10.65 ± 0.08 −307.62 ± 2.41
Spike_E484K/ACE2 −97.95 ± 0.54 −560.16 ± 2.37 174.02 ± 2.41 −11.25 ± 0.06 −495.37 ± 2.64
Spike_South_Africa_triple (K417N + E484K + N501Y)/ACE2 −120.46 ± 1.06 −418.06 ± 1.44 187.42 ± 3.38 −12.85 ± 0.11 −363.98 ± 2.34