TABLE 1.
Studies on HDAC family in ONCOMINE.
| Study (Glioma vs. Normal) | Fold change | p-valueadjusted | t-test | Cases (Tumor/Normal) | References | |
|---|---|---|---|---|---|---|
| HDAC1 | Atypical teratoid tumor | 4.597 | 8.32E-04 | 5.136 | 5/4 | Pomeroy Nature 2002/01/24 |
| Anaplastic oligoastrocytoma | 2.560 | 4.41E-04 | 5.148 | 4/6 | French Cancer Res 2005/12/15 | |
| Glioblastoma | 3.131 | 3.08E-08 | 14.61 | 542/10 | TCGA 2013/06/03 | |
| HDAC2 | Desmoplastic medulloblastoma | 3.133 | 1.09E-04 | 6.188 | 14/4 | Pomeroy Nature 2002/01/24 |
| Oligodendroglioma | 3.235 | 6.99E-04 | 8.816 | 3/7 | Shai Oncogene 2003/07/31 | |
| Glioblastoma | −3.683 | 2.70E-10 | −11.1 | 22/3 | Lee Cancer Cell 2006/05/01 | |
| Anaplastic oligoastrocytoma | −4.399 | 5.95E-04 | −5.14 | 6/4 | Bredel Cancer Res 2005/10/01 | |
| HDAC4 | Glioblastoma | −2.147 | 1.70E-13 | −15.6 | 80/4 | Murat J Clin Oncol 2008/06/20 |
| HDAC5 | Anaplastic oligoastrocytoma | −2.092 | 4.64E-05 | −8.11 | 6/4 | Bredel Cancer Res 2005/10/01 |
| Glioblastoma | −2.378 | 1.46E-07 | −12.2 | 27/4 | Bredel Cancer Res 2005/10/01 | |
| Anaplastic oligodendroglioma | −2.436 | 0.003 | −7.56 | 3/4 | Bredel Cancer Res 2005/10/01 | |
| Glioblastoma | −2.221 | 6.80E-20 | −11.7 | 81/23 | Sun Cancer Cell 2006/04/01 | |
| Glioblastoma | −2.742 | 3.08E-08 | −14.9 | 542/10 | TCGA 2013/06/03 | |
| HDAC6 | Glioblastoma | 3.221 | 8.88E-13 | 8.831 | 81/23 | Sun Cancer Cell 2006/04/01 |
| Anaplastic astrocytoma | 2.605 | 2.34E-06 | 5.48 | 19/23 | Sun Cancer Cell 2006/04/01 | |
| HDAC11 | Anaplastic oligoastrocytoma | −4.196 | 1.09E-05 | −9.32 | 4/6 | French Cancer Res 2005/12/15 |
| Anaplastic oligodendroglioma | −3.927 | 7.32E-06 | −9.90 | 23/6 | French Cancer Res 2005/12/15 | |
| Glioblastoma | −3.539 | 3.14E-14 | −11.0 | 81/23 | Sun Cancer Cell 2006/04/01 |