Table 8.
TEs that have a sRNA mapping to them are more likely to be methylated
| Young TEs in centromeres | Old TEs in centromeres | Young TEs not in centromeres | Old TEs not in centromeres | |||||
|---|---|---|---|---|---|---|---|---|
| sRNA+ | sRNA− | sRNA+ | sRNA− | sRNA+ | sRNA− | sRNA+ | sRNA− | |
| Small RNAs up-regulated in germinated spores | ||||||||
| TEs that are methylated (germinated spores) | 82.5% | 55% | 54.5% | 34.1% | 75.1% | 47.6% | 26.3% | 12.3% |
| TEs that are methylated (late infection) | 76.3% | 50.9% | 54.5% | 31.3% | 73.2% | 45.2% | 25.9% | 11.2% |
| Small RNAs up-regulated in late infection | ||||||||
| TEs that are methylated (germinated spores) | 80.3% | 44.6% | 61.4% | 32.1% | 82.9% | 39.9% | 66.2% | 11.3% |
| TEs that are methylated (late infection) | 74.6% | 41.1% | 53.4% | 29.7% | 80.4% | 37.6% | 63.2% | 10.3% |
| Small RNAs with no differential expression | ||||||||
| TEs that are methylated (germinated spores) | 83.5% | 54.7% | 64% | 34% | 79.7% | 47.2% | 62.5% | 12.2% |
| TEs that are methylated (late infection) | 77.4% | 50.6% | 56% | 31.3% | 77.4% | 44.8% | 61.7% | 11.1% |
| Small RNAs with 22 nts and 5′ adenine | ||||||||
| TEs that are methylated (germinated spores) | 82.1% | 50.6% | 65.7% | 33.3% | 86.3% | 44.5% | 57.4% | 12.1% |
| TEs that are methylated (late infection) | 75.6% | 46.9% | 55.2% | 30.7% | 84.8% | 42.1% | 55% | 11% |
| Average | 79% | 49.3% | 58.1% | 32.1% | 80% | 43.6% | 52.3% | 11.4% |