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. 2021 Sep 3;12:706683. doi: 10.3389/fmicb.2021.706683

TABLE 1.

Taxa enriched in different life stages of sea lamprey (Petromyzon marinus) as determined by LEfSe analysis.

No. Life stage LDA score1 Relative abundance (%)
Larvae Parasitic Adult
Larvae

1 Fusobacteriaceae; unclassified 5.01 23.1 ± 3.3 1.1 ± 3.2 10.3 ± 20.0
2 Verrucomicrobiales; unclassified 4.84 14.6 ± 2.0 0.2 ± 0.6 0.5 ± 1.6
3 Cetobacterium 4.30 4.40 ± 0.7 0.2 ± 0.7 1.7 ± 3.1
4 Chitinibacteraceae; unclassified 3.88 1.5 ± 0.5 0.0 ± 0.0 0.0 ± 0.1
5 Rhodocyclaceae; unclassified 3.88 1.5 ± 0.5 0.0 ± 0.0 0.0 ± 0.0
6 Rhodobacteraceae; unclassified 3.80 1.3 ± 0.5 0.1 ± 0.2 1.2 ± 1.9

Parasitic juvenile

1 Streptococcus 5.12 0.0 ± 0.0 28.2 ± 18.5 0.3 ± 1.0
2 Haemophilus 4.15 0.0 ± 0.0 2.8 ± 4.6 0.0 ± 0.1
3 Cutibacterium 4.11 0.0 ± 0.0 2.6 ± 2.4 0.1 ± 0.1

Adult

1 Aeromonas 5.23 4.3 ± 1.4 0.3 ± 0.9 33.6 ± 35.7
2 Iodobacter 4.82 0.0 ± 0.0 3.0 ± 6.7 13.8 ± 21.1
3 Shewanella 4.77 0.0 ± 0.0 0.0 ± 0.0 14.6 ± 23.4
4 Flavobacterium 4.25 1.3 ± 0.5 0.1 ± 0.2 3.6 ± 7.3
5 Actinobacteria; unclassified 4.22 0.0 ± 0.0 0.0 ± 0.0 0.1 ± 0.5
6 Rhodococcus 3.92 0.0 ± 0.0 0.0 ± 0.0 0.2 ± 0.4
7 Janthinobacterium 3.85 0.0 ± 0.0 0.0 ± 0.0 0.1 ± 0.2
8 Brevundimonas 3.82 0.0 ± 0.0 0.0 ± 0.0 0.5 ± 0.9

Relative abundance values are relative to the entire microbial community for each life stage. LEfSe, linear discriminant analysis effect size; LDA, linear discriminant analysis. 1Analysis was performed at a LDA score ≥3.75.