TABLE 1.
Taxa enriched in different life stages of sea lamprey (Petromyzon marinus) as determined by LEfSe analysis.
No. | Life stage | LDA score1 | Relative abundance (%) |
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Larvae | Parasitic | Adult | |||
Larvae | |||||
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1 | Fusobacteriaceae; unclassified | 5.01 | 23.1 ± 3.3 | 1.1 ± 3.2 | 10.3 ± 20.0 |
2 | Verrucomicrobiales; unclassified | 4.84 | 14.6 ± 2.0 | 0.2 ± 0.6 | 0.5 ± 1.6 |
3 | Cetobacterium | 4.30 | 4.40 ± 0.7 | 0.2 ± 0.7 | 1.7 ± 3.1 |
4 | Chitinibacteraceae; unclassified | 3.88 | 1.5 ± 0.5 | 0.0 ± 0.0 | 0.0 ± 0.1 |
5 | Rhodocyclaceae; unclassified | 3.88 | 1.5 ± 0.5 | 0.0 ± 0.0 | 0.0 ± 0.0 |
6 | Rhodobacteraceae; unclassified | 3.80 | 1.3 ± 0.5 | 0.1 ± 0.2 | 1.2 ± 1.9 |
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Parasitic juvenile | |||||
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1 | Streptococcus | 5.12 | 0.0 ± 0.0 | 28.2 ± 18.5 | 0.3 ± 1.0 |
2 | Haemophilus | 4.15 | 0.0 ± 0.0 | 2.8 ± 4.6 | 0.0 ± 0.1 |
3 | Cutibacterium | 4.11 | 0.0 ± 0.0 | 2.6 ± 2.4 | 0.1 ± 0.1 |
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Adult | |||||
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1 | Aeromonas | 5.23 | 4.3 ± 1.4 | 0.3 ± 0.9 | 33.6 ± 35.7 |
2 | Iodobacter | 4.82 | 0.0 ± 0.0 | 3.0 ± 6.7 | 13.8 ± 21.1 |
3 | Shewanella | 4.77 | 0.0 ± 0.0 | 0.0 ± 0.0 | 14.6 ± 23.4 |
4 | Flavobacterium | 4.25 | 1.3 ± 0.5 | 0.1 ± 0.2 | 3.6 ± 7.3 |
5 | Actinobacteria; unclassified | 4.22 | 0.0 ± 0.0 | 0.0 ± 0.0 | 0.1 ± 0.5 |
6 | Rhodococcus | 3.92 | 0.0 ± 0.0 | 0.0 ± 0.0 | 0.2 ± 0.4 |
7 | Janthinobacterium | 3.85 | 0.0 ± 0.0 | 0.0 ± 0.0 | 0.1 ± 0.2 |
8 | Brevundimonas | 3.82 | 0.0 ± 0.0 | 0.0 ± 0.0 | 0.5 ± 0.9 |
Relative abundance values are relative to the entire microbial community for each life stage. LEfSe, linear discriminant analysis effect size; LDA, linear discriminant analysis. 1Analysis was performed at a LDA score ≥3.75.