Table 3:
Accuracy metrics for predicting disease status
Disease | Model | Sensitivity | Specificity | Balanced accuracy | Misclassification | PPV1 | NPV2 |
---|---|---|---|---|---|---|---|
Healthy | iRF125 | 87.2 | 81.9 | 84.6 | 16.2 | 30.6 | 53.1 |
HCC | 81.8 | 87.2 | 84.5 | 14.4 | 24.3 | 61.3 | |
Cirrhosis | 33.3 | 92.9 | 63.1 | 21.6 | 8.1 | 70.3 | |
Average | 67.4 | 87.3 | 77.4 | 17.4 | 21 | 61.6 | |
Healthy | iRF12 | 87.2 | 85 | 86.1 | 14.1 | 34.3 | 51.5 |
HCC | 84.8 | 92.4 | 88.6 | 10.1 | 28.3 | 61.6 | |
Cirrhosis | 63 | 91.7 | 77.3 | 16.2 | 17.2 | 66.7 | |
Average | 78.3 | 89.7 | 84 | 13.5 | 26.6 | 59.9 | |
Healthy | iRF4 | 87.2 | 93.3 | 90.3 | 9.1 | 34.3 | 56.6 |
HCC | 87.9 | 95.4 | 91.7 | 7.1 | 29.3 | 63.6 | |
Cirrhosis | 81.5 | 90.3 | 85.9 | 12.1 | 22.2 | 65.7 | |
Average | 85.5 | 93 | 89.3 | 9.4 | 28.6 | 62 | |
Healthy | Decision Tree | 82 | 80.3 | 81.2 | 19.1 | 29.1 | 51.8 |
HCC | 87.9 | 93.5 | 90.7 | 8.2 | 26.4 | 65.4 | |
Cirrhosis | 81.5 | 90.4 | 85.9 | 11.8 | 20 | 68.2 | |
Average | 83.8 | 88.1 | 85.9 | 13 | 25.2 | 61.8 |
PPV=positive predictive value;
NPV=negative predictive value