Table 1.
Statistical data on the strain M2T genome
| Attribute | Value | Percentage% |
|---|---|---|
| DNA, total number of bases | 5,814,190 | 100 |
| DNA coding number of bases | 4,883,388 | 83.9 |
| DNA G + C number of bases | 4,193,912 | 72.1 |
| DNA scaffolds | 2 | 100 |
| CRISPR Count | 3 | |
| Genes total number | 5218 | 100 |
| Protein coding genes | 5107 | 97.8 |
| Regulatory and miscellaneous features | 15 | 0.2 |
| RNA genes | 96 | 1.8 |
| rRNA genes | 15 | 0.2 |
| 5S rRNA | 5 | 0.1 |
| 16S rRNA | 5 | 0.1 |
| 23S rRNA | 5 | 0.1 |
| tRNA genes | 58 | 1.1 |
| Other RNA genes | 23 | 0.4 |
| Protein coding genes with function prediction | 3539 | 67.8 |
| coding genes without function prediction | 1568 | 30.0 |
| Protein coding genes with enzymes | 1087 | 20.8 |
| Protein coding genes coding signal peptides | 203 | 3.8 |
| Protein coding genes with COGs3 | 3569 | 68.4 |
| Protein coding genes with KOGs3 | 988 | 18.8 |
| Protein coding genes with Pfam3 | 3890 | 74.5 |
| Protein coding genes with TIGRfam3 | 1122 | 21.5 |
| Protein coding genes with SMART | 1042 | 19.9 |
| Protein coding genes with SUPERFam | 4047 | 78.0 |
| COG clusters | 1679 | 47.0 |
| Pfam clusters | 2026 | 52.0 |