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. 2021 Sep 4;24(9):103089. doi: 10.1016/j.isci.2021.103089
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Rabbit polyclonal anti-β-Tubulin Abcam Cat#ab6046; RRID:AB_10807712
Rabbit polyclonal anti-SREBP2 Abcam Cat#30682; RRID:AB_779079
Rabbit monoclonal anti-phospho-Akt Serine 473 (D9E) Cell Signaling Cat#4060; RRID:AB_2315049
Rabbit polyclonal anti-Akt Cell Signaling Cat#9272; RRID:AB_329827
Rabbit monoclonal anti-phospho-AMPKα Threonine 172 (40H9) Cell Signaling Cat#2535; RRID:AB_331250
Rabbit polyclonal anti-AMPKα Cell Signaling Cat#2532; RRID:AB_330331
Rabbit polyclonal anti-phospho-GSK3B Serine 9 Cell Signaling Cat#9336; RRID:AB_331405
Mouse monoclonal Anti-TAF15 EnCor Biotechnology Cat#MCA-4D71; RRID:AB_2572388
Mouse monoclonal anti-CYP7A1 (15B9.1) Millipore Cat#MABD42; RRID:AB_2756360
Rabbit polyclonal anti-Gli1 Novus Biologicals Cat#NB600-600; RRID:AB_2111758
Rabbit polyclonal anti-HMGCR (JF0981) Novus Biologicals Cat#NBP2-66888; RRID:AB_2860021
Rabbit polyclonal anti-SRB1 Novus Biologicals Cat#NB400-101; RRID:AB_10107658
Rabbit polyclonal anti-AACS Proteintech Cat#13815-1-AP; RRID:AB_2877977
Rabbit polyclonal anti-ACAT2 Proteintech Cat#14755-1-AP; RRID:AB_2220236
Mouse monoclonal anti-β-Actin HRP (C4) Santa Cruz Cat#sc-47778; RRID:AB_2714189
Rabbit polyclonal anti-EGFR (1005) Santa Cruz Cat#sc-03; RRID:AB_631420
Mouse monoclonal anti-FGF-15 (D-9) Santa Cruz Cat#sc-514647
Mouse monoclonal anti-FXR/NR1H4 (D-3) Santa Cruz Cat#sc-25309; RRID:AB_628039
Rabbit polyclonal anti-Gli2 (H-300) Santa Cruz Cat#sc-28674; RRID:AB_2111908
Rabbit polyclonal anti-Gli3 (H-280) Santa Cruz Cat#sc-20688; RRID:AB_2109708
Mouse monoclonal anti-SHP (H-5) Santa Cruz Cat#sc-271511; RRID:AB_10649803
Mouse monoclonal anti-SREBP-1 (2A4) Santa Cruz Cat#sc-13551; RRID:AB_628282
Rabbit polyclonal anti-APOC2 Thermo Fisher Cat#PA5-102480; RRID:AB_2851882
Rabbit polyclonal anti-APOC3 Thermo Fisher Cat#PA5-116572
Rabbit polyclonal anti-CYP8B1 Thermo Fisher Cat#PA5-37088; RRID:AB_2553905
Anti-mouse IgG, HRP-linked antibody Cell Signaling Cat#7076; RRID:AB_330924
Rabbit IgG HRP Linked Whole antibody Millipore Cat#GENA934-1ML; RRID:AB_2722659

Bacterial and virus strains

AAV.TBG.Pl.Cre.rBG James M. Wilson Lab, Penn Vector Core Addgene AAV8; 107787-AAV8
pENN.AAV.TBG.Pl.ffLuciferase.RBG James M. Wilson Lab, Penn Vector Core Addgene, AAV8; 105538-AAV8

Chemicals, peptides, and recombinant proteins

Blotting-Grade Blocker BIO-RAD Cat# 1706404
Clarity Western ECL Substrate BIO-RAD Cat# 1705060
Bovine Serum Albumin ≥98% Millipore Sigma Cat# A7906-500G
Chloroform Millipore Sigma Cat# CX1060-1
cOmplete Mini EDTA-free Protease Inhibitor Cocktail Millipore Sigma Cat# 4693159001
Oil Red O Millipore Sigma Cat# O0625-25G
RIPA Buffer Millipore Sigma Cat# R0278-500ML
Restore Western Blot Stripping Buffer Thermo Fisher Cat# 21063
TRIzol Reagent Thermo Fisher Cat# 15596018

Critical commercial assays

Cholesterol/Cholesteryl Ester Quantitation Assay Kit Abcam Cat# ab65359
Triglyceride Colorimetric Assay Kit Cayman Chemical Cat# 10010303
Mouse Total Bile Acids Assay Kit Crystal Chem Cat# 80470
High-Capacity cDNA Reverse Transcription Kit Thermo Fisher Cat# 4368814
Pierce BCA Protein Assay Kit Thermo Fisher Cat# 23225
PowerTrack SYBR Green Master Mix Thermo Fisher Cat# A46111

Deposited data

Raw and analyzed data from this paper This Paper Mendeley Data; https://doi.org/10.17632/6mcj5n2xwg.1

Experimental models: Organisms/strains

Mouse Smotm2Amc/J (SMO-flox) Jackson Laboratory JAX stock# 004526

Oligonucleotides

Primers for Mus Musculus, see Table S1 This Paper N/A

Software and algorithms

GraphPad Prism Version 5 for Windows GraphPad Software https://www.graphpad.com
Primer-Blast NIH https://www.ncbi.nlm.nih.gov/tools/primer-blast/index.cgi?LINK_LOC=BlastHome
ImageJ Software NIH https://imagej.nih.gov/ij/
Microsoft Excel Microsoft Corporation https://office.microsoft.com/excel

Other

5053 - PicoLab Rodent Diet 20 (Chow Diet) LabDiet Cat# 3005740-220
Standard chow diet (0.02% w/w cholesterol) Envigo Cat# 130104
High cholesterol diet (0.2% w/w cholesterol) Envigo Cat# 160514
Kinetex 2.6 μm C18 LC column 150 x 4.6 mm Phenomenex Cat# 00F-4462-E0
ChemiDoc MP Imaging System BIO-RAD Cat# 17001402
Nitrocellulose Membrane BIO-RAD Cat# 1620112
StepOnePlus Real-Time PCR System Applied Biosystems Cat# 4376600
Tecan Infinite M200 Pro Microplate Reader Tecan Model# M200