| Antibodies |
|
| Rabbit polyclonal anti-β-Tubulin |
Abcam |
Cat#ab6046; RRID:AB_10807712
|
| Rabbit polyclonal anti-SREBP2 |
Abcam |
Cat#30682; RRID:AB_779079
|
| Rabbit monoclonal anti-phospho-Akt Serine 473 (D9E) |
Cell Signaling |
Cat#4060; RRID:AB_2315049
|
| Rabbit polyclonal anti-Akt |
Cell Signaling |
Cat#9272; RRID:AB_329827
|
| Rabbit monoclonal anti-phospho-AMPKα Threonine 172 (40H9) |
Cell Signaling |
Cat#2535; RRID:AB_331250
|
| Rabbit polyclonal anti-AMPKα |
Cell Signaling |
Cat#2532; RRID:AB_330331
|
| Rabbit polyclonal anti-phospho-GSK3B Serine 9 |
Cell Signaling |
Cat#9336; RRID:AB_331405
|
| Mouse monoclonal Anti-TAF15 |
EnCor Biotechnology |
Cat#MCA-4D71; RRID:AB_2572388
|
| Mouse monoclonal anti-CYP7A1 (15B9.1) |
Millipore |
Cat#MABD42; RRID:AB_2756360
|
| Rabbit polyclonal anti-Gli1 |
Novus Biologicals |
Cat#NB600-600; RRID:AB_2111758
|
| Rabbit polyclonal anti-HMGCR (JF0981) |
Novus Biologicals |
Cat#NBP2-66888; RRID:AB_2860021
|
| Rabbit polyclonal anti-SRB1 |
Novus Biologicals |
Cat#NB400-101; RRID:AB_10107658
|
| Rabbit polyclonal anti-AACS |
Proteintech |
Cat#13815-1-AP; RRID:AB_2877977
|
| Rabbit polyclonal anti-ACAT2 |
Proteintech |
Cat#14755-1-AP; RRID:AB_2220236
|
| Mouse monoclonal anti-β-Actin HRP (C4) |
Santa Cruz |
Cat#sc-47778; RRID:AB_2714189
|
| Rabbit polyclonal anti-EGFR (1005) |
Santa Cruz |
Cat#sc-03; RRID:AB_631420
|
| Mouse monoclonal anti-FGF-15 (D-9) |
Santa Cruz |
Cat#sc-514647 |
| Mouse monoclonal anti-FXR/NR1H4 (D-3) |
Santa Cruz |
Cat#sc-25309; RRID:AB_628039
|
| Rabbit polyclonal anti-Gli2 (H-300) |
Santa Cruz |
Cat#sc-28674; RRID:AB_2111908
|
| Rabbit polyclonal anti-Gli3 (H-280) |
Santa Cruz |
Cat#sc-20688; RRID:AB_2109708
|
| Mouse monoclonal anti-SHP (H-5) |
Santa Cruz |
Cat#sc-271511; RRID:AB_10649803
|
| Mouse monoclonal anti-SREBP-1 (2A4) |
Santa Cruz |
Cat#sc-13551; RRID:AB_628282
|
| Rabbit polyclonal anti-APOC2 |
Thermo Fisher |
Cat#PA5-102480; RRID:AB_2851882
|
| Rabbit polyclonal anti-APOC3 |
Thermo Fisher |
Cat#PA5-116572 |
| Rabbit polyclonal anti-CYP8B1 |
Thermo Fisher |
Cat#PA5-37088; RRID:AB_2553905
|
| Anti-mouse IgG, HRP-linked antibody |
Cell Signaling |
Cat#7076; RRID:AB_330924
|
| Rabbit IgG HRP Linked Whole antibody |
Millipore |
Cat#GENA934-1ML; RRID:AB_2722659
|
|
| Bacterial and virus strains |
|
| AAV.TBG.Pl.Cre.rBG |
James M. Wilson Lab, Penn Vector Core |
Addgene AAV8; 107787-AAV8 |
| pENN.AAV.TBG.Pl.ffLuciferase.RBG |
James M. Wilson Lab, Penn Vector Core |
Addgene, AAV8; 105538-AAV8 |
|
| Chemicals, peptides, and recombinant proteins |
|
| Blotting-Grade Blocker |
BIO-RAD |
Cat# 1706404 |
| Clarity Western ECL Substrate |
BIO-RAD |
Cat# 1705060 |
| Bovine Serum Albumin ≥98% |
Millipore Sigma |
Cat# A7906-500G |
| Chloroform |
Millipore Sigma |
Cat# CX1060-1 |
| cOmplete Mini EDTA-free Protease Inhibitor Cocktail |
Millipore Sigma |
Cat# 4693159001 |
| Oil Red O |
Millipore Sigma |
Cat# O0625-25G |
| RIPA Buffer |
Millipore Sigma |
Cat# R0278-500ML |
| Restore Western Blot Stripping Buffer |
Thermo Fisher |
Cat# 21063 |
| TRIzol Reagent |
Thermo Fisher |
Cat# 15596018 |
|
| Critical commercial assays |
|
| Cholesterol/Cholesteryl Ester Quantitation Assay Kit |
Abcam |
Cat# ab65359 |
| Triglyceride Colorimetric Assay Kit |
Cayman Chemical |
Cat# 10010303 |
| Mouse Total Bile Acids Assay Kit |
Crystal Chem |
Cat# 80470 |
| High-Capacity cDNA Reverse Transcription Kit |
Thermo Fisher |
Cat# 4368814 |
| Pierce BCA Protein Assay Kit |
Thermo Fisher |
Cat# 23225 |
| PowerTrack SYBR Green Master Mix |
Thermo Fisher |
Cat# A46111 |
|
| Deposited data |
|
| Raw and analyzed data from this paper |
This Paper |
Mendeley Data; https://doi.org/10.17632/6mcj5n2xwg.1
|
|
| Experimental models: Organisms/strains |
|
| Mouse Smotm2Amc/J (SMO-flox) |
Jackson Laboratory |
JAX stock# 004526 |
|
| Oligonucleotides |
|
| Primers for Mus Musculus, see Table S1
|
This Paper |
N/A |
|
| Software and algorithms |
|
| GraphPad Prism Version 5 for Windows |
GraphPad Software |
https://www.graphpad.com |
| Primer-Blast |
NIH |
https://www.ncbi.nlm.nih.gov/tools/primer-blast/index.cgi?LINK_LOC=BlastHome |
| ImageJ Software |
NIH |
https://imagej.nih.gov/ij/ |
| Microsoft Excel |
Microsoft Corporation |
https://office.microsoft.com/excel |
|
| Other |
|
| 5053 - PicoLab Rodent Diet 20 (Chow Diet) |
LabDiet |
Cat# 3005740-220 |
| Standard chow diet (0.02% w/w cholesterol) |
Envigo |
Cat# 130104 |
| High cholesterol diet (0.2% w/w cholesterol) |
Envigo |
Cat# 160514 |
| Kinetex 2.6 μm C18 LC column 150 x 4.6 mm |
Phenomenex |
Cat# 00F-4462-E0 |
| ChemiDoc MP Imaging System |
BIO-RAD |
Cat# 17001402 |
| Nitrocellulose Membrane |
BIO-RAD |
Cat# 1620112 |
| StepOnePlus Real-Time PCR System |
Applied Biosystems |
Cat# 4376600 |
| Tecan Infinite M200 Pro Microplate Reader |
Tecan |
Model# M200 |