TABLE 1.
Sequences of oligonucleotide primers used in the amplification of the pbp1A gene
Primera | Sequence (5′ to 3′) | Position in pbp1A geneb | Product length (bp) after amplification with downstream primer 1A-2 |
---|---|---|---|
1A-R1 | AAGAACACTGGTTATGTA | 2662–2679 | 224 |
1A-R2 | AGCATGCATTATGCAAAC | 2317–2334 | 569 |
1A-1 | ACAAATGTAGACCAAGAAGCTCAA | 1843–1866 | 1,043 |
1A-2 | TACGAATTCTCCATTTCTGTAGAG | 2863–2886 |
Primers 1A-1 and 1A-2 are specific for pneumococci. Primers 1A-R1 and 1A-R2 specifically amplify pneumococcal isolates for which the penicillin MICs are ≥0.25 and ≥1 μg/ml, respectively.
According to the sequence data of Smith and Klugman (22).