Table 2.
Parameter values used in the model of Bedessem and Stephanou in [19]. The Michaelis-Menten coefficients are abbreviated as MM
| Parameter | Description | Value |
|---|---|---|
| Cyclin D synthesis rate | 0.51 | |
| Cyclin D spontaneous degradation rate | 1.00 | |
| HIF-mediated degradation rate | ||
| Fitting parameter from HIF measurements | 2.50 | |
| active E2F-induced and cell growth-dependent synthesis rate of cyclin E | ||
| Cyclin E spontaneous degradation rate | 0.50 | |
| SCF activation rate | 1.00 | |
| SCF inactivation rate | 14.0 | |
| MM coefficient for SCF activation | 0.04 | |
| MM coefficient for SCF activation | 0.04 | |
| Unphosphorylated Rb synthesis rate | 0.20 | |
| Cyclin D-mediated Rb phosphorylation rate | 0.10 | |
| Unphosphorylated Rb spontaneous degradation rate | 0.10 | |
| Cell growth rate | ||
| Maximal size of cell growth | 10 | |
| E2F dephosphorylation rate | ||
| Scaled sum of total E2F (both phosporylated and unphosphorylated) | 1 | |
| Cyclin E amount required for progression to S phase | 0.15 |