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. 2021 Jun 5;107(2):579–596. doi: 10.1111/tpj.15313

Table 1.

Metrics of publicly available eggplant genome assemblies: Smel v1.0 from Hirakawa et al. (2014), S. aethiopicum from Song et al. (2019), Smel v3.0 from Barchi et al. (2019b), Smel CL from Wei et al. (2020a), and Smel v4.0 (this paper)

Smel v1.0 S. aethiopicum Smel v3.0 Smel CL Smel v4.0
Size of assembly (Gb) 0.83 1.02 1.21 1.07 1.16
Contig N50 (kb) 14.3 25.2 678.7 5260 702.9
Scaffold N50 (Mb) 0.065 516.1 2.9 89.64 92.1
% Ns 4.75 28.23 0.38 9.10
% anchored 77.5% 92.7% 95.6%
Protein‐coding genes 85 446 34 906 34 916 36 582 34 916
% anchored genes 0% 0% 81.4% 97.4% 96.6%
Annotated BUSCO genes 74.8% 77.8% 96.9% 94.2% 96.9%