TABLE 2.

Summary of BLAST hits (100%) to AMR regions found in this collection.

IS26 flanked class 1 integron, chromate resistance and macrolide inactivation structure (Figure 4A1)
Species	Strain	ST	Plasmid name	Accession	pMLST	Host	Location	Date
E. coli	118UI	69	pEco118UIb	NZ_CP032516.1	IncF NT	Human	Mexico	2009
E. coli	CA08	131	pCA08	CP009233.1	F2:A-:B20	Human	United States	NA
E. coli	Ecol_867	131	pEC_867_1	CP018982.1	F-:A-:B20	Human	Canada	2013
E. coli	AR_0104	131	unitig_5	NZ_CP020117.1	F1:A-:B-	NA	NA	NA
E. coli	DA33135	131	pDA33135-139	NZ_CP029577.1	F29:A-:B10	Human	Sweden	NA
E. coli	E41-1	131	p1	NZ_CP028484.1	F1:A-:B20	Human	China	2017
E. coli	TO60	131	p2	NZ_LS992169.1	F1:A-:B20	NA	NA	NA
E. coli	U15A	131	pU15A_A	NZ_CP035721.1	IncI1-Iγ	Human	United States	2015
E. coli	MO	131	pMO	MG886288.1	F1:A-:B20	Water	NA	NA
E. coli	AR_0086	131	pUnnamed1	NZ_CP032202.1	F2:A-:B20	NA	NA	NA
E. coli	131	131	p146-1	NZ_CP041573.1	IncF NT	Human	United States	NA
E. coli	E303	131	pE303_IMP6	AP022363.1	IncF NT	Human	Japan	2015
E. coli	425	131	p425	MK295830.1	F1:A6:B20	Human	Israel	2007
E. coli	HOS15	131	-	SRR11495735	-	Human	Australia	2006
E. coli	HOS58	131	-	SRR11495760	-	Human	Australia	2007
E. coli	A1_181	410	p_unnamed3	NZ_CP040070.1	F1:A-:B-	Seagull	United States	2016
E. coli	ECONIH1	648	pECO-824	NZ_CP009860.1	F1:A-:B1	Human	United States	2013
E. coli	MS14385	648	p2	NZ_LR130556.1	F1:A-:B-	Human	Australia	NA
K. michiganensis	K518	NA	Chromosome	NZ_CP023185.1	Chromosome	Human	China	2017
K. pneumoniae	F93-2	17	pF93-2_1	NZ_CP026158.1	F2:A-:B-	Human	China	2014
K. pneumoniae	FDAARGOS_439	147	pUnnamed	NZ_CP023918.1	F2:A22:B-	Human	Canada	2014
blaCTX–M–15 and qnrS1-containing structure (Figure 4B1)
Species	Strain	ST	Plasmid name	Accession	pMLST	Host	Location	Date
E. coli	MRSN346647	38	pMRSN346647_113.1	NZ_CP018207.1	F-:A-:B53	Human	United States	2016
E. coli	2014EL-1345-2	182	pUnnamed 3	CP024226.1	IncB/O/K/Z	Human	United States	2014
tetA-containing structure (Figure 4D1)
Species	Strain	ST	Plasmid name	Accession	pMLST	Host	Location	Date
E. coli	ECCWS199	48	pTB222	NZ_CP032239.1	IncN	Chicken	China	2017
K. pneumoniae	TH164	873	pTH164-1	NZ_CP035212.1	IncR	Human	Thailand	2012
S. enterica	SCSM4.1	34	plas4.1.1	NZ_CP047116.1	IncHI2	Chicken	China	2019
S. enterica	sg_wt7	36	Chromosome	NZ_CP036168.1	Chromosome	Food	Singapore	2016