TABLE 1.

The twenty-one genes considered in the simulation studies.

No.	Chromosome	Gene	q 1	q 2
1	1	GNB1	15	10
2	5	LOC102467217	7	1
3	4	PDE5A	11	1
4	11	C11orf48	2	2
5	1	CTTNBP2NL	5	2
6	9	PTCH1	12	3
7	9	SLC25A25	4	3
8	17	CCL15-CCL14	9	4
9	6	CD164	7	4
10	11	IGSF22	10	5
11	3	CRBN	9	5
12	12	VAMP1	5	6
13	19	CLEC17A	7	6
14	5	DMGDH	21	7
15	6	LPA	24	7
16	15	CD276	7	8
17	12	MED13L	19	8
18	3	KBTBD12	22	9
19	6	HLA-DQB2	19	9
20	5	GM2A	12	10
21	13	LRRC63	20	10

The information contains the chromosome, gene id, number of SNVs ((q₁)), and number of CNV segments ((q₂)). Some variants in the first gene, GNB1, are taken as the causal variants in all simulation settings except A1.