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. 2021 Oct;27(10):1127–1139. doi: 10.1261/rna.078800.121

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© 2021 Holmqvist et al.; Published by Cold Spring Harbor Laboratory Press for the RNA Society

This article, published in RNA, is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/.

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FIGURE 3. — Comprehensive annotation of RPMS1 in transformed epithelial tissue. The upper segment displays the starting reference annotation of RPMS1 as it is used in FLAME. Departures with respect to the RefSeq reference (addition of exon Ia, Ib, and II) are indicated. Moreover, exon III is by convention regarded as one constitutive exon, although it is divided into two constituents in the RefSeq reference. Alternative exons discovered by FLAME are displayed in the middle segment. The nomenclature and coordinates of all exons are listed in the attached table. Putative open reading frames are displayed in the bottom segment. Numbers on the X-axis refer to the global position in the EBV genome.