TABLE 1.
hsp65 sequence variations within M. abscessus, M. chelonae, M. fortuitum, and M. peregrinum
| Strain | Base substitutiona |
|---|---|
| M. abscessus IP140420023T | T (530) T (533) C (542) C (602) C (605) G (644) C (755) |
| IP970515, IP971181, N94130020, N96118308, N96125674, N96127994, N97119238 | • • • • • • • |
| N94050100, N96117130, N96147159, IP970272 | G C T • T • T |
| IP970453 | G C T • T C • |
| IP140420009, N92129889, N94117403, N95120337 | G C T T T C • |
| M. chelonae IP140420003T | C (548) T (572) C (626) A (646) T (662) C (752) |
| IP970212, IP970640, IP970663, IP970691, IP970838, IP140420005, IP140420006, N93107077 | • • • • C • |
| IP140420019 | • C T C C T |
| IP970474, IP970475, IP970476, IP970570 | G C T C C T |
| M. fortuitum IP140410001T | C (491) A (536) T (551) C (620) G (623) G (638) G (641) A (648) G (649) |
| IP970186, IP970196, IP970218, IP970323, IP970331, IP970376, IP970396, IP970420, IP970436, IP971263, L97117576, L97124472, N96113001 | • • • • • • • • • |
| IP970522 | • C • • • • • • • |
| Biovariant 3 | |
| IP980015, sorbitol + | • C C • • • • • • |
| IP980016, sorbitol − | T C C G A C C T C |
| M. peregrinum IP140410020T | T (461) C (491) G (503) T (506) C (542) T (617) C (638) C (641) T (648) C (649) A (707) G (797) G (800) |
| IP970300, IP970301, IP970432, IP970477, N97100967 | • • • • • • • • • • • • • |
| L97109695 | • • • • A • • • • • T • • |
| IP970227, IP970674, IP971262, IP971265, L97105494 | • • • • • C • • • • • • C |
| IP970455 | C T A • • • G G A G • • • |
| IP970407, IP970408 | • T • C • C G G A G • T C |
a
Bases differing between species are shown. Type strain sequence is used as a reference sequence, with nucleotide positions given in parentheses. Substituted bases are indicated; dots indicate identity.