Table 3.
Significant haplotypes in taste receptor genes associated with PTC intake in rams.
| Gene | Locations and haplotype* | P-value |
|---|---|---|
| TAS2R42-like | 3:218872709, 3:218872798, 3:218872818, 3:218872939, 3:218872942, 3:218872977, 3:218873004, 3:218873008, 3:218873059, 3:218873295, 3:218873381, 3:218873404, 3:218873413, 3:218873518, 3:218873552, 3:218873678, 3:218873703, 3:218873722, 3:218873771, 3:218873800, 3:218873802, 3:218873869 | 5.067E−05 |
| G, T, A, T, C, G, A, G, G, C, T, T, T, T, G, C, C, G, G, T, G, A | ||
| TAS2R31-like | 3:218909211, 3:218909225, 3:218909242, 3:218909259, 3:218909471, 3:218909696, 3:218909813, 3:218909860, 3:218909873, 3:218909924, 3:218909947, 3:218910086 | 0.004 |
| T, T, G, A, T, T, G, C, T, G, A, C | ||
| TAS2R9 | 3:219066474, 3:219066528, 3:219066529, 3:219066621, 3:219066682, 3:219066686, 3:219067174, 3:219067187, 3:219067247, 3:219067271, 3:219067323 | 0.002 |
| G, A, T, G, A, G, A, A, G, G, G | ||
| TAS2R8 | 3:219068310, 3:219068366, 3:219068393, 3:219068463, 3:219068570, 3:219068572, 3:219068634 | 0.030 |
| T, G, A, A, T, A, C | ||
| TAS2R8 | 3:219068699, 3:219068761, 3:219069019, 3:219069021 | 0.007 |
| A, A, A, T | ||
| TAS2R16 | 4:95494095, 4:95494125, 4:95494164 | 0.009 |
| G, C, C | ||
| TAS2R3 | 4:113926390, 4:113927769 | 0.028 |
| T, G | ||
| TAS2R4 | 4:113940107, 4:113940522, 4:113941205, 4:113941293, 4:113941383, 4:113941740, 4:113941860, 4:113941862, 4:113941960 | 0.050 |
| C, G, G, C, C, T, C, G, T | ||
| TAS2R5 | 4:113955710, 4:113956096, 4:113956118, 4:113956150, 4:113956190, 4:113956216, 4:113956230, 4:113956501 | 0.043 |
| C, T, A, C, C, T, G, A | ||
| TAS2R38 | 4:114099430, 4:114099567, 4:114099648, 4:114099679, 4:114099708, 4:114099738, 4:114099818, 4:114099916, 4:114100153, 4:114100217 | 0.027 |
| A, A, T, G, T, A, G, G, C, T | ||
| TAS2R39 | 4:115407175, 4:115407221, 4:115407222, 4:115407601, 4:115407644, 4:115407656, 4:115407701, 4:115407842, 4:115407991, 4:115408072, 4:115408190, 4:115408410, 4:115408492 | 0.018 |
| T, T, G, A, C, G, G, A, T, T, T, C, T, C |
* Position is displayed as chromosome number: base pair location. Locations and nucleotides in bold are SNPs that are significant individually as well as within the haplotype.