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. 2021 Sep 9;9:729444. doi: 10.3389/fcell.2021.729444

TABLE 1.

Key resources.

Reagent or resource Source Identifier
Antibodies
Rabbit polyclonal anti-PDZD11 Citi Laboratory (Guerrera et al., 2016) Rb29958
Guinea pig polyclonal anti-PLEKHA7 Citi Laboratory (Guerrera et al., 2016) GP2737
Mouse monoclonal anti-β-tubulin Thermo Fisher Scientific Cat# 32-2600, RRID: AB_2533072
Mouse monoclonal anti-α-tubulin Thermo Fisher Scientific Cat# 32-2500, RRID: AB_2533071
Guinea pig monoclonal anti-α-tubulin Geneva Antibody Facility (Guerreiro and Meraldi (2019). Antibody Reports) AA345 scFv-F2C
Rabbit polyclonal anti-GFP Thermo Fisher Scientific Cat# A-11122, RRID: AB_221569
Mouse monoclonal anti-HA Thermo Fisher Scientific Cat# 32-6700, RRID: AB_2533092
Mouse monoclonal anti-E-cadherin BD Biosciences Cat# 610181, RRID: AB_397580
Rat monoclonal anti-ZO-1 Goodenough Laboratory (Harvard Medical School) R40.76 RRID: AB_2205518
Rabbit polyclonal anti-GST Thermo Fisher Scientific Cat# 71-7500 RRID: AB_2533994
Alexa Fluor 488-AffiniPure Donkey anti-Rabbit IgG Jackson ImmunoResearch Cat# 711-545-152, RRID: AB_2313584
Cy3-AffiniPure Donkey anti-Mouse IgG Jackson ImmunoResearch Cat# 715-165-151, RRID: AB_2315777
Alexa Fluor 647-AffiniPure Donkey anti-Guinea Pig IgG Jackson ImmunoResearch Cat# 706-605-148, RRID: AB_2340476
Cy5-AffiniPure Donkey anti-Rat IgG Jackson ImmunoResearch Cat# 712-175-153, RRID: AB_2340672
Anti-Mouse IgG (H + L), HRP conjugate Promega Cat# W4021, RRID: AB_430834
Anti-Rabbit IgG (H + L), HRP conjugate Promega Cat# W4011, RRID: AB_430833
Bacterial Strains
BL21-DE3 Competent cells NEB Cat# C2530H
DH5-α Competent cells Thermo Fisher Cat# 18265017
Chemicals and Recombinant Proteins
Poly-L-Lysine solution Sigma-Aldrich Cat# P4707
MG132 Sigma-Aldrich Cat# C2211
GST-human PLEKHA5-PH (120-270) Citi Laboratory (This paper) S2090
GST-human PLEKHA6-PH (120-285) Citi Laboratory (This paper) S2095
GST-human PLEKHA7-PH (120-300) Citi Laboratory (Guerrera et al., 2016) S1795
Critical Commercial Assays
jetOPTIMUS DNA Transfection Reagent Polyplus Cat# 117-15
3.5 kDa-MWCO dialysis membrane (Spectra/Por3 3,500 MWCO 18mm) Spectrum Laboratories Cat# 132720
PIP Strips Echelon Biosciences Cat# P-60001
Pierce Glutathione Magnetic Agarose Beads Thermo Fisher Scientific Cat# 78602
Matrigel BD Biosciences Cat# 354230
Protease inhibitor cocktail Thermo Fisher Scientific Cat# A32965
Experimental Models: Cell Lines
Mouse cortical collecting duct cell line, mCCD WT N64-Tet-ON Feraille Laboratory, Unige N/A
Mouse cortical collecting duct cell line, mCCD PLEKHA7-KO N64-Tet-ON Citi Laboratory (Guerrera et al., 2016; Shah et al., 2018) N/A
Mouse cortical collecting duct cell line, mCCD PDZD11-KO N64-Tet-ON Citi Laboratory (Guerrera et al., 2016) N/A
Mouse cortical collecting duct cell line, mCCD PLEKHA6-KO N64-Tet-ON Citi Laboratory (Sluysmans et al., 2021) N/A
Mouse cortical collecting duct cell line, mCCD PLEKHA6/7-KO N64-Tet-ON Citi Laboratory (Sluysmans et al., 2021) N/A
Canine kidney proximal tubule cell line, MDCK-II WT Tet-OFF Fanning Laboratory, U. North Carolina N/A
Canine kidney proximal tubule cell line, MDCK-II PLEKHA5-KO Tet-OFF Citi Laboratory (Sluysmans et al., 2021) N/A
Canine kidney proximal tubule cell line, MDCK-II PLEKHA6-KO Tet-OFF Citi Laboratory (Sluysmans et al., 2021) N/A
Human haploid cell lines, Hap1 WT, PLEKHA7-KO Amieva Laboratory, Standford (Popov et al., 2015) N/A
Human haploid cell line, Hap1 PDZD11-KO Citi Laboratory (Shah et al., 2018) N/A
Human haploid cell line, Hap1 PLEKHA5-KO Citi Laboratory (Sluysmans et al., 2021) N/A
Human haploid cell line, Hap1 PLEKHA5/7-KO Citi Laboratory (Sluysmans et al., 2021) N/A
Recombinant DNA
pcDNA3.1(zeo +) human PDZD11-HA Citi Laboratory (Guerrera et al., 2016) S1766
pcDNA3.1(zeo +) GFP-human PDZD11-myc Citi Laboratory (Guerrera et al., 2016) S1744
pTRE2hyg YFP-human PLEKHA7-myc Citi Laboratory (Paschoud et al., 2014) S1431
pTRE2hyg YFP-human PLEKHA7-Nter (1-562)-myc Citi Laboratory (Paschoud et al., 2014) S1432
pTRE2hyg YFP-human PLEKHA7-ΔPH (1-162 + 282-1121)-myc Citi Laboratory (Shah et al., 2018) S1826
pcDNA3.1(–) GFP-myc Citi Laboratory (Paschoud et al., 2011) S1166
pTRE2hyg YFP-myc Citi Laboratory (Paschoud et al., 2014) S1210
pcDNA3.1(–) GFP-human PLEKHA5-FL Citi Laboratory (Sluysmans et al., 2021) S2530
pcDNA3.1(–) GFP-human PLEKHA5-WW-PH (1-270) Citi Laboratory (This paper) S2482
pcDNA3.1(–) GFP-human PLEKHA5-Nter (1-504) Citi Laboratory (This paper) S2483
pcDNA3.1(–) GFP-human PLEKHA5-Cter (410-1116) Citi Laboratory (This paper) S2522
pcDNA3.1(–) GFP-human PLEKHA5-PH (164-270) Citi Laboratory (This paper) S2565
pcDNA3.1(–) GFP-human PLEKHA5-ΔPH (1-169 + 271-1116) Citi Laboratory (This paper) S2523
pcDNA3.1(–) GFP-human PLEKHA5-ΔWW (107-1116) Citi Laboratory (This paper) S2528
pcDNA3.1(–) GFP-human PLEKHA5-FL ΔCC (1-633 + 680-1116) Citi Laboratory (This paper) S2654
pcDNA3.1(–) GFP-human PLEKHA5-Cter ΔCC (410-633 + 680-1116) Citi Laboratory (This paper) S2660
pcDNA3.1(–) GFP-human PLEKHA6-FL Citi Laboratory (Sluysmans et al., 2021) S2531
pcDNA3.1(–) GFP-human PLEKHA6-WW-PH (1-284) Citi Laboratory (This paper) S2487
pcDNA3.1(–) GFP-human PLEKHA6-Nter (1-520) Citi Laboratory (This paper) S2488
pcDNA3.1(–) GFP-human PLEKHA6-Cter (515-1297) Citi Laboratory (This paper) S2525
pcDNA3.1(–) GFP-human PLEKHA6-PH (158-284) Citi Laboratory (This paper) S2566
pcDNA3.1(–) GFP-human PLEKHA6-ΔPH (1-163 + 285-1297) Citi Laboratory (This paper) S2526
pcDNA3.1(–) GFP-human PLEKHA6-ΔWW (98-1297) Citi Laboratory (This paper) S2529
pcDNA3.1(–) GFP-human PLEKHA6-FL ΔCC (1-724 + 774-1297) Citi Laboratory (This paper) S2655
pcDNA3.1(–) GFP-human PLEKHA6-Cter ΔCC (515-724 + 774-1297) Citi Laboratory (This paper) S2661
pcDNA3.1(–) GFP-human PLEKHA7-FL ΔCC (1-685 + 740-1121) Citi Laboratory (This paper) S2657
pcDNA3.1(–) GFP-human PLEKHA7-Cter ΔCC (500-685 + 740-1121) Citi Laboratory (This paper) S2663
pcDNA3.1(–) GFP-human PLEKHA5-WW(1-106):PLEKHA6(98-1297) (chimera) Citi Laboratory (This paper) S2538
pcDNA3.1(–) GFP-human PLEKHA5-WW(1-106):PLEKHA7(97-1121) (chimera) Citi Laboratory (This paper) S2539
pcDNA3.1(–) GFP-human PLEKHA6-PH(164-284):PLEKHA5(1-169/271-1116) (chimera) Citi Laboratory (This paper) S2532
pcDNA3.1(–) GFP-human PLEKHA7-PH(165-284):PLEKHA5(1-169/271-1116) (chimera) Citi Laboratory (This paper) S2533
pcDNA3.1(–) GFP-human PLEKHA5-PH(170-270):PLEKHA6(1-163/285-1297) (chimera) Citi Laboratory (This paper) S2534
pcDNA3.1(–) GFP-human PLEKHA7-PH(165-284): PLEKHA6(1-163/285-1297) (chimera) Citi Laboratory (This paper) S2535
pcDNA3.1(–) GFP-human PLEKHA5-PH(170-270):PLEKHA7(1-164/285-1121) (chimera) Citi Laboratory (This paper) S2536
pcDNA3.1(–) GFP-human PLEKHA6-PH(164-284): PLEKHA7(1-164/285-1121) (chimera) Citi Laboratory (This paper) S2537
pTRE2hyg YFP-human PLEKHA7-Cter (500-1121)-myc Citi Laboratory (This paper) S1897
pTRE2hyg YFP-human PLEKHA7-PH (160-300)-myc Citi Laboratory (This paper) S1899
Softwares and Algorithms
FIJI Schindelin et al. (2012). Nature Methods 9(7): 676-682. imagej.net/Fiji
Adobe Photoshop N/A adobe.com
Adobe Illustrator N/A adobe.com
Image Studio Lite LI-COR www.licor.com/bio/image-studio-lite/
SnapGene N/A snapgene.com/
GraphPad Prism 8 N/A graphpad.com/scientific-software/prism/