Table 1.

Clinical details for patients in whom SARS-CoV-2 was detected prior to 12 March 2020. A and E: Accident and emergency department, ICU: Intensive care unit, SOB: Shortness of breath.

Detection method	Patient ID	Sequence no.	Sample type	Patient contact	Collection date	Age	Sex	Travel history	HoSPital admission	Tested by NUH	Clinical features	Lineage
Retrospective PCR on residual diagnostic material	1	NOTT-1118C7	Throat Swab	No contact	21/02/20	75	F	None reported	Yes	Yes	A and E admission following a fall, severe respiratory failure. Recent history of rigours and chills in the past week plus some diarrhoea. Admitted to ICU, ventilated, developed fatal multiple organ failure.	B
	2	NOTT-10DF8D	Throat Swab	No contact	02/03/20	64	M	None reported	Yes	No	Possible liver Abscess Repeated fevers Clear Chest X-Ray.	B
	3	NOTT-10F167	Throat Swab	No contact	08/03/20	66	M	None reported	Yes	No	Sore throat Guillain-Barre syndrome Mild Chest X-ray changes.	B
IDENTIFIED BY retrospective clinical audit	4	NOTT-10DEBD	BAL	No contact	07/03/20	69	M	None reported	Yes	Yes	3 day fever, headache and confusion. Spouse admitted 2 weeks earlier with same symptoms Worsening O2, ICU admission.	B
	5	NOTT-10DEAE	BAL	No contact	07/03/20	63	M	None reported	Yes	Yes	Fever and shortness of breath for 3 days, fatigue for 7 days. No coryza, cough or myalgia Admitted to ICU and ventilated. Developed fatal multi-organ failure.	B
	6	NOTT-10DECC	Throat Swab	No contact	11/03/20	65	M	None reported	No	Yes	2 day history of fever, sore throat, dry cough, fatigue.	B
	7	NOTT-10DEF9 NOTT-10DEDB	Throat Swab	No contact	11/03/20	54	M	None reported	Yes	Yes	Admitted via A and E. SOB, productive cough, sore throat, mild headache and chest pain. Cough for 2 days.	B.2.2
	8	NOTT-10E48D	Throat Swab	No contact	12/03	70	M	None reported	Yes	Yes	Presented to A and E with SOB, started on the day of admission.	B.2.5
Referred for PHE Testing	9	hCoV-19/England/20104013504/2020	Throat Swab	10	28/02	38	M	South Korea	No	No	Fever	B
	10	No sequence data	Throat Swab	9	05/03	34	F	Contact	No	No	Community test, no admission	Unknown
	11	No sequence data	Throat Swab	12	03/03	57	M	Northern Italy	No	No	Dry cough and fever	Unknown
	12	No sequence data	Throat Swab	11	06/03	55	F	Northern Italy	No	No	Cough	Unknown
	13	No sequence data	Throat Swab	None	03/03	61	F	Northern Italy	No	No	Cough	Unknown
	14	No sequence data	Throat Swab	None	06/03	72	F	Northern Italy	No	No	Cough	Unknown
	15	No sequence data	Throat Swab	16	10/03	41	F	Switzerland	No	No	Community test, no admission	Unknown
	16	No sequence data	Throat Swab	15	10/03	44	F	Switzerland	No	No	Community test, no admission	Unknown
	17	No sequence data	Throat Swab	None	10/03	34	M	None	No	No	Cough and fever	Unknown