KEY RESOURCES TABLE
| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| Deposited data | ||
|
| ||
| E. coli proteomic data | Valgepea et al., 2013Mol. BioSyst.9 pp. 2344–2358. DOI: 10.1039/c3mb70119k | http://www.rsc.org/suppdata/mb/c3/c3mb70119k/c3mb70119k.xlsx |
| E. coli proteomic data | Li et al., 2014Cell157 pp. 624–635. DOI: 10.1016/j.cell.2014.02.033 | https://ars.els-cdn.com/content/image/1-s2.0-S0092867414002323-mmc1.xlsx |
| E. coli proteomic data | Peebo et al., 2015. Mol. Biosyst.11 pp. 1184–1193. DOI: 10.1039/c4mb00721b | http://www.rsc.org/suppdata/mb/c4/c4mb00721b/c4mb00721b1.xlsx |
| E. coli proteomic data | Schmidt et al., 2016Nat. Biotech.34 pp. 108 – 110. DOI: 10.1038/nbt.3418 | https://static-content.springer.com/esm/art%3A10.1038%2Fnbt.3418/MediaObjects/41587_2016_BFnbt3418_MOESM18_ESM.xlsx |
|
| ||
| Software and algorithms | ||
|
| ||
| Python version 3.8.8 distributed via Anaconda | Python Software Foundation; Anaconda Org | http://www.anaconda.org |
| Matplotlib Python Plotting Library version 3.3.4 | Matplotlib Organization | https://matplotlib.org/ |
| Pandas Python DataFrame Library version 1.2.4 | Pydata Organization | https://pandas.pydata.org/ |
| Adobe Illustrator 2020 | Adobe Incorporated | https://www.adobe.com/products/illustrator |
| Pathway Tools | SRI International | https://bioinformatics.ai.sri.com/ptools/ |