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. 2021 Aug 20;7(9):1561–1571. doi: 10.1021/acscentsci.1c00703

Table 1. Spectral Properties of HDyesa.

                    intra- extra-
name X R1 R2 λabs [nm] λem [nm] ε [104 (M cm)−1] ΦF D0.5 turn-on cellular application
o-TzR (26) O H H 557 583 5.52 0.003 - 95 - -
(557) (582) (7.41) (0.447)
o-TzSiR SiMe2 H H 652 671 2.16 0.007 - 45 - -
HD555 (27) O H CO2H 555 581 5.10 0.004 17 113/123b + +
(556) (583) (10.0) (0.571) (19)
HD5Slx O CO2H H 561 588 7.70 0.007 - 45 - +
HD653 (28) SiMe2 H CO2H 653d 676d 4.86d 0.022d 60 50b + +
(652d) (674d) (5.92d) (0.477d) (63)
HD654x SiMe2 CO2H H 654 673 12.5 0.007 - 33 - +
sb-HD656 (29) SiMe2 H CH2OH 656c 676c 11.4c 0.026c - 9.0c + +
(656c) (677c) (10.4c) (0.310c)
a

All measurements were performed in phosphate-buffered saline (PBS pH 7.4) and turn-on experiments with 15 eq BCN unless noted otherwise. Properties of respective BCN cycloadducts of the dyes listed in parentheses (see Figure S9 for all structures and Figure S10 for spectra). The assignment of the substituents refers to the general structure in Figure 1a.

b

10 eq of EGFP–HaloTag–BCN.

c

Sodium phosphate buffer pH 3.5.

d

50 mM SDS in PBS pH 7.4.