Table 2.
The full NLR gene complements of five Cucurbita genome assemblies
| Protein domainsa | C. argyrosperma | C. maxima | C. moschata | C. pepo | C. sororia |
|---|---|---|---|---|---|
| Full-length | |||||
| CC-NB-LRR | 3 | 14 | 28 | 5 | 9 |
| TIR-NB-LRR | 4 | 5 | 14 | 1 | 10 |
| RPW8-NB-LRR | 5 | 5 | 5 | 6 | 5 |
| Total full-lengthb | 12 | 24 | 47 | 12 | 24 |
| Partial | |||||
| CC-NB | 3 | 3 | 4 | – | 2 |
| CC-LRR | – | – | 2 | 2 | – |
| TIR-NB | 1 | 3 | 5 | 3 | 5 |
| TIR-LRR | – | – | – | 1 | – |
| NB | 1 | 5 | 4 | 2 | 4 |
| TIR | 6 | 10 | 9 | 5 | 10 |
| LRR | 2 | 7 | 15 | 14 | 4 |
| RPW8 | 2 | 1 | 1 | 2 | 2 |
| Total partialb | 15 | 29 | 40 | 29 | 27 |
| Totalc | 27 | 53 | 87 | 41 | 51 |
aCC coiled coil; LRR leucine-rich repeat; NB nucleotide binding; RPW8 resistance to powdery mildew 8; TIR toll/interleukin receptor
bSubtotals of partial and full-length NLR genes
cAmount of annotated NLR genes