Table 6.
The hypothalamic DEGs of tame versus aggressive rats found in this work in comparison with their known homologous DEGs in domestic animals versus their wild congeners as reported by others.
# | Hypothalamic DEGs, Tame vs. Aggressive Rats | DEGs Within the Tissues of the Domestic Animals versus Their Wild Congeners | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
DEG | log2 | PADJ | Tame/Domestic | Wild/Aggressive | Tissue | DEG | log2 | PADJ | [Ref] | |
i | ii | iii | iv | v | vi | vii | viii | ix | x | xi |
1 | Banp | −0.82 | 10−3 | rabbits | rabbits | hippocampus | Banp | −1.39 | 0.05 | [28] |
2 | Banp | −0.82 | 10−3 | rabbits | rabbits | parietal-temporal cortex | Banp | −1.21 | 10−2 | [28] |
3 | Cd22 | 2.85 | 10−2 | dogs | wolves | blood | Cd22 | 2.34 | 0.05 | [24] |
4 | Cd22 | 2.85 | 10−2 | foxes | foxes | pituitary | Cd22 | 0.32 | 10−2 | [23] |
5 | Defb17 | 6.02 | 0.05 | rabbits | rabbits | parietal-temporal cortex | Defb1 | 1.19 | 10−2 | [28] |
6 | Eif2b3 | 0.63 | 0.05 | guinea pigs | cavy | frontal cortex | Eif2b3 | 0.72 | 10−3 | [25] |
7 | Fcgr3a | 2.06 | 10−2 | rabbits | rabbits | parietal-temporal cortex | Fcgr3b | 1.35 | 10−2 | [28] |
8 | Fcrl2 | 1.12 | 0.05 | foxes | foxes | pituitary | Fcrl1 | 0.43 | 10−2 | [23] |
9 | Ghitm | 0.40 | 0.05 | guinea pigs | cavy | frontal cortex | Ghitm | −0.58 | 0.05 | [25] |
10 | Hbb-b1 | −3.97 | 10−2 | dogs | wolves | blood | Hbbl | −5.92 | 10−8 | [24] |
11 | Hbb-b1 | −3.97 | 10−2 | dogs | wolves | blood | Hba1 | −4.06 | 10−5 | [24] |
12 | Hbb-b1 | −3.97 | 10−2 | chicken | chicken | pituitary | Hbad | −1.07 | 10−2 | [29] |
13 | Hbb-b1 | −3.97 | 10−2 | dogs | wolves | blood | Hbm | −6.46 | 10−6 | [24] |
14 | Hbb-b1 | −3.97 | 10−2 | dogs | wolves | blood | Hbz1 | −7.10 | 10−2 | [24] |
15 | Hspa1b | −1.25 | 0.05 | rabbits | rabbits | parietal-temporal cortex | Hspa5 | −1.12 | 0.05 | [28] |
16 | Hspa1b | −1.25 | 0.05 | rabbits | rabbits | amygdala | Hspa5 | −1.12 | 0.05 | [28] |
17 | Hspa1b | −1.25 | 0.05 | rabbits | rabbits | parietal-temporal cortex | Hspa8 | −1.46 | 10−9 | [28] |
18 | Hspa1b | −1.25 | 0.05 | rabbits | rabbits | amygdala | Hspa8 | −1.10 | 0.05 | [28] |
19 | Hspa1b | −1.25 | 0.05 | rabbits | rabbits | hippocampus | Hspa8 | −1.36 | 10−2 | [28] |
20 | Ifi27l2b | 2.36 | 0.05 | chicken | chicken | pituitary | Ifi6 | −2.49 | 10−4 | [29] |
21 | Krt2 | −1.65 | 10−4 | chicken | chicken | pituitary | Krt17 | −1.12 | 0.05 | [29] |
22 | Liph | 3.28 | 0.05 | guinea pigs | cavy | frontal cortex | Lipa | 0.84 | 10−2 | [25] |
23 | Liph | 3.28 | 0.05 | guinea pigs | cavy | frontal cortex | Lipm | 1.45 | 10−2 | [25] |
24 | Liph | 3.28 | 0.05 | chicken | chicken | pituitary | Lipml | 0.55 | 10−3 | [29] |
25 | Mogat2 | 2.08 | 0.05 | rabbits | rabbits | hippocampus | Mogat1 | −1.93 | 0.05 | [28] |
26 | Morn1 | 1.24 | 10−6 | foxes | foxes | pituitary | Morn2 | −0.25 | 0.05 | [23] |
27 | Morn1 | 1.24 | 10−6 | guinea pigs | cavy | frontal cortex | Morn2 | 0.89 | 0.05 | [25] |
28 | Mre11a | −2.47 | 10−3 | guinea pigs | cavy | frontal cortex | Mre11a | 1.42 | 10−4 | [25] |
29 | Nr4a3 | −1.29 | 10−4 | chicken | chicken | pituitary | Nr4a3 | −0.85 | 0.05 | [29] |
30 | Nr4a3 | −1.29 | 10−4 | rabbits | rabbits | amygdala | Nr4a3 | −1.58 | 0.05 | [28] |
31 | Nr4a3 | −1.29 | 10−4 | guinea pigs | cavy | frontal cortex | Nr2c1 | −0.74 | 10−2 | [25] |
32 | Nr4a3 | −1.29 | 10−4 | chicken | chicken | pituitary | Nr3c1 | 0.51 | 10−5 | [29] |
33 | Nr4a3 | −1.29 | 10−4 | guinea pigs | cavy | frontal cortex | Nr5a1 | −2.19 | 0.05 | [25] |
34 | Orai1 | 1.83 | 0.05 | guinea pigs | cavy | frontal cortex | Orai1 | −1.30 | 10−3 | [25] |
35 | P2rx4 | 1.14 | 0.05 | guinea pigs | cavy | frontal cortex | P2rx6 | 0.55 | 0.05 | [25] |
36 | Pcdhb9 | −1.01 | 0.054 | guinea pigs | cavy | frontal cortex | Pcdh20 | −0.73 | 0.05 | [25] |
37 | Pcdhb9 | −1.01 | 0.054 | guinea pigs | cavy | frontal cortex | Pcdhac1 | 0.72 | 10−2 | [25] |
38 | Pcdhb9 | −1.01 | 0.054 | rabbits | rabbits | parietal-temporal cortex | Pcdhb15 | −1.04 | 0.05 | [28] |
39 | Pcdhb9 | −1.01 | 0.054 | rats | rats | frontal cortex | Pcdhga1 | 2.10 | 10−5 | [25] |
40 | Pcdhb9 | −1.01 | 0.054 | rabbits | rabbits | amygdala | Pcdhgb4 | 1.53 | 10−4 | [28] |
41 | Pcdhb9 | −1.01 | 0.054 | rabbits | rabbits | parietal-temporal cortex | Pcdhgb4 | 1.06 | 10−4 | [28] |
42 | Pcdhb9 | −1.01 | 0.054 | rabbits | rabbits | hypothalamus | Pcdhgb4 | 1.67 | 10−2 | [28] |
43 | Pla2g2c | −1.08 | 0.05 | rabbits | rabbits | parietal-temporal cortex | Pla1a | 1.35 | 10−2 | [28] |
44 | Pla2g2c | −1.08 | 0.05 | guinea pigs | cavy | frontal cortex | Pla2g4a | −1.74 | 10−7 | [25] |
45 | Pla2g2c | −1.08 | 0.05 | rabbits | rabbits | parietal-temporal cortex | Pla2g4c | 2.29 | 10−8 | [28] |
46 | Pla2g2c | −1.08 | 0.05 | rabbits | rabbits | amygdala | Pla2g4c | 2.34 | 10−3 | [28] |
47 | Pla2g2c | −1.08 | 0.05 | rabbits | rabbits | hippocampus | Pla2g4c | 1.63 | 0.05 | [28] |
48 | Pla2g2c | −1.08 | 0.05 | guinea pigs | cavy | frontal cortex | Pla2g5 | −1.01 | 0.05 | [25] |
49 | Pla2g2c | −1.08 | 0.05 | chicken | chicken | pituitary | Pla2g7 | −0.83 | 10−2 | [29] |
50 | Rbm3 | 1.04 | 10−3 | guinea pigs | cavy | frontal cortex | Rbm11 | 1.02 | 0.05 | [25] |
51 | Sh3bgr | 1.11 | 0.05 | guinea pigs | cavy | frontal cortex | Sh3bgr | 0.99 | 10−2 | [25] |
52 | Shox2 | 6.18 | 0.05 | rabbits | rabbits | hippocampus | Shox2 | −3.43 | 10−3 | [28] |
53 | Spint1 | −0.91 | 0.05 | dogs | wolves | blood | Spint1 | 5.28 | 10−2 | [24] |
54 | Tpm2 | 1.44 | 10−2 | foxes | foxes | pituitary | Tpm4 | 0.84 | 10−8 | [23] |