Skip to main content
. 2021 Sep 3;10(9):2307. doi: 10.3390/cells10092307

Table 1.

Summary of phage-display selection methods. Six different phage-display screens were carried out using biotinylated EPAC1ΔDEP as a target (screens S01–S06). Pre-panning deselection and off-rate deselection was performed in pans 2 and/or 3 as a process of negative selection. Here, homologous proteins, (EPAC1ΔDEP with no ligand) were premixed with the phage library, either as immobilized proteins and/or as proteins in solution. Off- rate deselection involves allowing the Affimer-expressing phage to bind to the target, washing away unbound phage and incubating the phage bound to immobilized target overnight in buffer before eluting the following morning; this drive selection towards Affimer proteins with the slowest off-rates. Enrichment refers to the number of captured phage with affinity for biotinylated EPAC1ΔDEP, as indicated by number of positive, phage-transformed bacteria following the panning step compared to a negative selection well.

Screen Page Display Method Phage-Display
Enrichment
Target Pre-Panning
Deselection
Off-Rate
Deselection
S01 EPAC1ΔDEP None In pans 2 and 3 9 × over neutravidin
S02 EPAC1ΔDEP plus 007 EPAC1ΔDEP in Pans 2 and 3 In pans 2 and 3 1.2 × over EPAC1ΔDEP
S03 EPAC1ΔDEP plus CE3F4 EPAC1ΔDEP in Pans 2 and 3 In pans 2 and 3 1.2 × over EPAC1ΔDEP
S04 EPAC1ΔDEP None In pan 3 ~2 × over neutravidin
S05 EPAC1ΔDEP plus 007 EPAC1ΔDEP in Pans 2 and 3 Not performed 2.5 × over EPAC1ΔDEP
S06 EPAC1ΔDEP plus CE3F4 EPAC1ΔDEP in Pans 2 and 3 Not performed 1.4 × over EPAC1ΔDEP