Table 4.
miRNAs and proteins implicated in the Endocytosis and TNF signalling KEGG pathways.
| TNF Signalling Pathway | Endocytosis Pathway | ||
|---|---|---|---|
| miRNAs Involved (n = 53): | Proteins/Genes Involved (n = 55): | miRNAs Involved (n = 55): | Proteins/Genes Involved (n = 129): |
| miR-103-3p | Akt1 | miR-103-3p | 2610002M06Rik |
| miR-107-3p | Atf2 | miR-107-3p | Acap2 |
| miR-124-3p | Bag4 | miR-124-3p | Acap3 |
| miR-125a-5p | Bcl3 | miR-125a-5p | Adrb1 |
| miR-125b-5p | Ccl2 | miR-125b-5p | Adrb2 |
| miR-130a-3p | Ccl20 | miR-127-5p | Adrb3 |
| miR-130b-3p | Cebpb | miR-130a-3p | Adrbk1 |
| miR-135a-5p | Cflar | miR-130b-3p | Agap1 |
| miR-135b-5p | Chuk | miR-132-3p | Ap2b1 |
| miR-136-5p | Creb1 | miR-135a-5p | Ap2m1 |
| miR-139-5p | Creb3l1 | miR-135b-5p | Arap2 |
| miR-140-5p | Creb3l2 | miR-136-5p | Arap3 |
| miR-142a-5p | Creb5 | miR-139-5p | Arf3 |
| miR-144-3p | Csf1 | miR-140-5p | Arf5 |
| miR-150-5p | Cx3cl1 | miR-142a-5p | Arf6 |
| miR-153-3p | Cxcl1 | miR-144-3p | Arfgef1 |
| miR-155-5p | Cxcl10 | miR-150-5p | Arfgef2 |
| miR-181a-5p | Dnm1l | miR-153-3p | Arrb1 |
| miR-181b-5p | Edn1 | miR-155-5p | Asap1 |
| miR-185-5p | Fos | miR-181a-5p | Asap2 |
| miR-19a-3p | Il18r1 | miR-181b-5p | Cav1 |
| miR-19b-3p | Jun | miR-185-5p | Cav2 |
| miR-200b-3p | Junb | miR-19a-3p | Cbl |
| miR-200c-3p | Lif | miR-19b-3p | Cblb |
| miR-20b-5p | Lta | miR-200b-3p | Cdc42 |
| miR-221-3p | Magi2 | miR-200c-3p | Chmp1a |
| miR-224-5p | Map2k1 | miR-20b-5p | Chmp2b |
| miR-25-3p | Map2k4 | miR-212-3p | Chmp3 |
| miR-298-5p | Map2k7 | miR-221-3p | Chmp4c |
| miR-29a-3p | Map3k14 | miR-224-5p | Chmp5 |
| miR-29c-3p | Map3k5 | miR-25-3p | Chmp6 |
| miR-30a-5p | Map3k7 | miR-298-5p | Chmp7 |
| miR-30b-5p | Map3k8 | miR-29a-3p | Clta |
| miR-30c-5p | Mapk10 | miR-29c-3p | Cltb |
| miR-30e-5p | Mapk12 | miR-30a-5p | Cltc |
| miR-325-3p | Mapk14 | miR-30b-5p | Cxcr2 |
| miR-329-3p | Mapk8 | miR-30c-5p | Cxcr4 |
| miR-330-5p | Mapk9 | miR-30e-5p | Cyth1 |
| miR-342-5p | Nfkb1 | miR-325-3p | Cyth3 |
| miR-363-3p | Nfkbia | miR-329-3p | Dab2 |
| miR-369-3p | Pik3cb | miR-330-5p | Dnm1 |
| miR-376c-3p | Pik3cd | miR-363-3p | Dnm3 |
| miR-381-3p | Pik3r1 | miR-369-3p | Eea1 |
| miR-382-5p | Pik3r2 | miR-376c-3p | Egfr |
| miR-495-3p | Pik3r3 | miR-381-3p | Ehd2 |
| miR-499-5p | Rela | miR-382-5p | Ehd3 |
| miR-543-3p | Rps6ka4 | miR-495-3p | Ehd4 |
| miR-667-3p | Rps6ka5 | miR-499-5p | Epn2 |
| miR-671-5p | Socs3 | miR-543-3p | Epn3 |
| miR-674-5p | Tab2 | miR-667-3p | Eps15 |
| miR-705 | Tab3 | miR-671-5p | Erbb4 |
| miR-721 | Tnf | miR-674-5p | F2r |
| miR-9-5p | Tnfrsf1a | miR-705 | Fgfr2 |
| Tnfrsf1b | miR-721 | Flt1 | |
| Traf3 | miR-9-5p | Folr2 | |
| Gbf1 | |||
| Git2 | |||
| Grk1 | |||
| Grk4 | |||
| Grk5 | |||
| H2-K1 | |||
| H2-M3 | |||
| H2-Q1 | |||
| H2-T23 | |||
| Hspa1b | |||
| Hspa2 | |||
| Igf1r | |||
| Iqsec1 | |||
| Iqsec2 | |||
| Kdr | |||
| Kit | |||
| Ldlrap1 | |||
| Mdm2 | |||
| Met | |||
| Nedd4 | |||
| Nedd4l | |||
| Pard3 | |||
| Pard6b | |||
| Pdcd6ip | |||
| Pip5k1b | |||
| Pip5k1c | |||
| Pld1 | |||
| Pld2 | |||
| Pml | |||
| Prkcz | |||
| Psd | |||
| Psd2 | |||
| Psd3 | |||
| Rab11a | |||
| Rab11b | |||
| Rab11fip1 | |||
| Rab11fip2 | |||
| Rab11fip4 | |||
| Rab11fip5 | |||
| Rab22a | |||
| Rab5a | |||
| Rab5b | |||
| Rab5c | |||
| Ret | |||
| Rhoa | |||
| Sh3glb1 | |||
| Sh3kbp1 | |||
| Smad6 | |||
| Smad7 | |||
| Smap1 | |||
| Smap2 | |||
| Smurf1 | |||
| Smurf2 | |||
| Src | |||
| Stam | |||
| Stam2 | |||
| Tfrc | |||
| Tgfb2 | |||
| Tgfbr1 | |||
| Tgfbr2 | |||
| Tonsl | |||
| Traf6 | |||
| Usp8 | |||
| Vps25 | |||
| Vps36 | |||
| Vps37a | |||
| Vps37b | |||
| Vps37c | |||
| Vps37d | |||
| Vps4b | |||
| Wwp1 | |||
| Zfyve16 | |||
| Zfyve20 | |||
| Zfyve9 | |||