Table 4.
Transcriptional factor binding region on candidate Mesenchymal genes.
Mesenchymal Genes Promoter | Proposed Transcription Factors | Proposed Binding Motif | References |
---|---|---|---|
FN | Snail | −576 TCACA −570 | [36,37] |
E/S overlapping | −360 CGGCGGGCGGGCGGGC −345 | [38,39] | |
MMP9 | Snail | −818 TCACA −812 | [15,17] |
E/S overlapping | −797 GAGCCCCCCACCCCCC −781 | [17] | |
LEF | Snail | −1287 TCACA −1281 | [40,41] |
E/S overlapping | −1195 CCCTCACCCCCCGCCT −1179 | ||
ZEB1 | Snail | −1065 TCACA −1059 | [17] |
E/S overlapping | −933 AAGAGGGCGGGGAGCG −915 | [17] | |
COX2 | Snail | −968 TCACA −962 | [42] |
E/S overlapping | −911 CCTTTCCCGCCTCTC −896 | ||
VIMENTIN | Snail | −2318 TCACA −2312 | [43] |
E/S overlapping | −1976 CCCCCTGCCGCCACC−1960 | [44,45] | |
VITRONECTIN | Snail | −1373 TCACA −1367 | [46,47] |
E/S overlapping | −1238 GCACCCGCCCACCAC −1222 | [48] | |
COL1A1 | Snail | −1071 TCACA −1065 | [49,50] |
E/S overlapping | −993 CCCCAATCCCCACCTC −976 | [51,52] | |
α-SMA | Snail | −689 TGTGA −683 | [31,53] |
E/S overlapping | −507 GCTCTCTCCCCGCCCC −490 | [54] | |
N-cadherin | Snail | −311 TCACA −305 | [55,56] |
E/S overlapping | −289 CCCCCGCCCCCTCCCC −272 | [57,58] | |
TWIST1 | Snail | −723 TCACA −717 | [59] |
E/S overlapping | −606 CCCCGCGCCCGCCGGA −590 |