Table 3.
Primer | Sequence (5′–3′) 1 | Target Sequence | Positions in Gene | Tm (°C) | Purpose |
---|---|---|---|---|---|
Cel8A_F | CAGTCGGTACCGTGAAGAACGTAAAAAAAAGAGTAGGTGTGG | CP000568 | 1–31 | 77.9 | Cloning |
Cel8A_R | CTAGTAAGCTTCTAATAAGGTAGGTGGGGTATGCTCTTTATC | CP000568 | 1403–1434 | 76 | Cloning |
Cel48S_F | CAGTCGGTACCATGGTAAAAAGCAGAAAGATTTCTATTCTG | CP000568 | 1–30 | 74.9 | Cloning |
Cel48S_R | CTAGTAAGCTTTTAGTTCTTGTACGGCAATGTATCTATTTC | CP000568 | 2196–2226 | 72.9 | Cloning |
SP_F | CTTAAGCAAAAGGAGAGGGACGCGT | pBES_cel8A | 312–337 | 67.4 | Sequencing |
SP_R | GTAGGTGTGGTTTTGCTGATTCTTGC | pBES_cel8A | 475–502 | 64 | Sequencing |
RTCel8AF | TCTTGCAGTGTTGGGGGTTT | CP000568 | 42–61 | 58.4 | RT-PCR |
RTCel8AR | CAGGCGCAAAATATGACGGG | CP000568 | 655–636 | 60.5 | RT-PCR |
RTCel48SF | CTGCATTCGCAGGTCCTACA | CP000568 | 71–90 | 60.5 | RT-PCR |
RTCel48SR | AAGAAGACACATCCGGCTGC | CP000568 | 397–378 | 60.5 | RT-PCR |
eglS_F | AACAAAGATTCAACGAAGGACGCC | NZ_CP011937 | 994–1017 | 63.5 | RT-PCR |
eglS_R | TGGGTTCTGTTCCCCAAATCA | NZ_CP011937 | 1495–1475 | 59.4 | RT-PCR |
BLcelB_F | GCCAATGAAAAGCATTCAAAATGG | WP_011197981 | 901–924 | 60.1 | RT-PCR |
BLcelB_R | CCATAACCTGGCTGGCTCC | WP_011197981 | 1351–1333 | 61.7 | RT-PCR |
BLcelC_F | GGTTCGTCAGGAGACTCTGG | CP034569 | 1000–1019 | 62.5 | RT-PCR |
BLcelC_R | ATCTGGATTTCGCCAGTATCAG | CP034569 | 1406–1385 | 60.3 | RT-PCR |
BLcelA_F | CGATTTAACGGGAGGGTGGT | LR134392 | 252–271 | 60.5 | RT-PCR |
BLcelA_R | GTCTAGAGCGCCATTTCCGA | LR134392 | 483–464 | 60.5 | RT-PCR |
1 The underlined sequences represent the sites recognized by endonucleases: KpnI (Cel8A_F, Cel48S_F) and HindIII (Cel8A_R, Cel48S_R).