Table 4.

Results of conditional association analyses for C20:4 and MUFAs using SNP markers in the 749.1 kb critical region in SSC12.

					C20:4				MUFA
					Single-Marker Analysis		Conditional Analysis		Single-Marker Analysis		Conditional Analysis
No	1 BP	SNP annotation	2 Allele 1	3 r	4 b	5p-value	6 β	7p-value	4 b	5p-value	6 β	7p-value
1	12:54812172	intron-GAS7	T	−0.443	0.145	3.30 × 10−11	0.031	0.164	−1.021	4.32 × 10−7	0.204	0.694
2	12:54842795	intron-GAS7	T	0.390	−0.089	0.0003	0.025	0.324	0.543	0.0197	0.234	0.060
3	12:54901488	intron-GAS7	G	−0.382	0.076	0.0002	−0.004	0.861	−0.572	0.0033	0.195	0.537
4	12:54929793	intron-GAS7	G	0.638	0.182	2.24 × 10−22	0.050	0.010	−1.458	1.80 × 10−17	0.176	0.027
5	12:54956054	intron-GAS7	C	*-	−0.305	9.66 × 10−42	**-	**-	2.404	3.30 × 10−31	**-	**-
6	12:55073130	coding-MYH13	A	−0.581	0.154	1.43 × 10−12	−0.003	0.909	−1.108	5.52 × 10−8	0.191	0.354
7	12:55093697	intron MYH13	A	−0.354	0.059	0.014	−0.031	0.193	−0.479	0.032	0.294	0.189
8	12:55120479	3′UTR MYH8	G	−0.548	0.157	1.32 × 10−13	0.016	0.452	−1.389	1.59 × 10−12	−0.202	0.314
9	12:55180513	3′UTR MYH4	G	−0.556	0.160	1.19 × 10−14	0.022	0.310	−1.383	6.56 × 10−13	−0.222	0.260
10	12:55229376	exon MYH2	G	0.996	−0.289	2.77 × 10−38	† NA	† NA	2.302	3.74 × 10−29	† NA	† NA
11	12:55262653	exon MYH2	T	0.996	−0.299	2.58 × 10−40	† NA	† NA	2.357	3.50 × 10−30	† NA	† NA
12	12:55351879	intron MYH3	A	0.702	0.209	6.64 × 10−23	0.018	0.421	−1.613	3.45 × 10−16	−0.066	0.745
13	12:55373617	5′UTR MYH3	G	0.866	−0.272	8.39 × 10−32	−0.022	0.383	2.025	3.13 × 10−21	0.054	0.809
14	12:55373707	5′UTR MYH3	2	0.999	−0.301	5.67 × 10−41	† NA	† NA	2.381	7.35 × 10−31	† NA	† NA
15	12:55447604	intron ADPRM	G	0.626	−0.228	3.51 × 10−15	−0.016	0.586	1.836	1.09 × 10−11	0.053	0.849
16	12:55463919	intron ADPRM	G	0.946	−0.291	5.64 × 10−38	−0.008	0.758	2.348	1.23 × 10−29	0.120	0.587
17	12:55475542	intron ADPRM	T	−0.630	0.178	4.09 × 10−21	0.045	0.020	−1.404	5.31 × 10−16	−0.328	0.064
18	12:55530321	intron ENSSSCG 00000044652	A	−0.101	0.127	9.33 × 10−4	0.084	0.030	−1.444	0.0001	−1.062	0.004
19	12:55561243	intron ENSSSCG 00000044652	T	0.106	−0.034	0.079	−0.012	0.523	0.376	0.036	0.193	0.285

¹ Physical map position of SNP markers in the 749.1 kb critical region in SSC12; ² reference allele; ³ LD correlation between the key SNP marker (shaded with grey color; the SNP at 12:54956054) and corresponding SNP markers; ⁴ regression coefficients computed from single-marker analysis; ⁵ p-values computed from single-marker analysis; ⁶ regression coefficients calculated from conditional analysis; ⁷ p-values calculated from conditional analysis; bold characters represent SNP markers showing extremely high LD correlation with the key SNP marker; ^† absence of regression coefficients and significance due to collinearity originated from extremely high LD with the key SNP marker. * We did not calculate the LD correlation because r is the correlation between the key SNP and other SNPs; ** We did not compute the β and p-value of the key SNP marker in the conditional analysis.