Figure 3.

The (A) site-frequency spectrum (SFS) and (B) per chromosome location pair-wise relative differentiation (Φ_ST) estimates between Rock Pigeon, Eurasian Collared-Dove, Mourning Dove and White-winged Dove estimated across the Z-sex and 27 autosomal chromosomes (also see Supporting Information Figure S1). We also provide (C) the composite pair-wise relative Φ_ST estimates between the four dove species and across the mitochondrial cytochrome oxidase subunit 1 (COI) gene, as well as concatenated datasets of each ddRAD-seq autosomal and Z-sex chromosome linked loci.