Table 3.
List of isolates whose identification showed invalid results by the Bruker Biotyper or ASTA MicroIDSys systems.
| Bruker | ASTA | Identification by 16S rRNA Sequencing (Accession) |
|||
|---|---|---|---|---|---|
| Identification | Score | Identification | Score | ||
| Correct identification by Bruker * | Pantoea calida | 2.236 | Invalid Identification | Pantoea calida (AB907785.1) | |
| Weeksella virosa | 2.184 | Invalid Identification | Weeksella virosa (CP002455.1) | ||
| Streptococcus mitis | 1.805 | Invalid Identification | Streptococcus mitis (NR_028664.1) | ||
| Correct identification by ASTA * | Invalid Identification | Propionibacterium acnes | 200 | Propionibacterium acnes (CP003084.1) | |
| Invalid Identification | Moraxella osloensis | 160 | Moraxella osloensis (CP014234.1) | ||
| Invalid Identification | Weissella confusa | 203 | Weissela cibaria (LC096236.1) | ||
| Invalid Identification | Brevibacillus centrosporus | 134 | Brevibacillus limnophilus (NR_024822.1) | ||
| Invalid Identification | Paenibacillus lactis | 115 | Paenibacillus spp. (JN377815.1) | ||
| Incorrect identification | Lactobacillus jensenii | 2.003 | Invalid Identification | Brevibacterium frigoritolerans (NR_117474.1) | |
| Invalid Identification | Staphylococcus arlettae | 117 | Pseudoglutamicibacter cumminsii (NR_044895.1) | ||
| Invalid Identification | Parvimonas micra | 125 | Dermabacter vaginalis (CP012117.1) | ||
| Invalid Identification | Bacillus simplex | 131 | Brevibacterium frigoritolerans (NR_117474.1) | ||
| Invalid Identification | Knoellia subterranea | 132 | Janibacter hoylei (NR_104794.1) | ||
| Invalid Identification | Paenibacillus timonensis | 125 | Lysinibacillus spp. (HE586367.1) | ||
* It was regarded as correct identification when the results by Bruker or ASTA was concordant with the results by 16S rRNA sequencing at the genus level.