Table 2.

The whole genome constellation of the four reassortant study strains detected between 2014 and 2016 (post-vaccine period) in Zambia along with the contig length and the number of reads mapped to each contig.

Strain		VP7	VP4	VP6	VP1	VP2	VP3	NSP1	NSP2	NSP3	NSP4	NSP5
UFS-NGS-MRC-DPRU13232	Genotype	G1	P[8]	I1	R1	C1	M1	A1	N2	T1	E1	H1
	Contig length	1062	2359	1356	3301	2717	2591	1567	1059	1074	750	644
	Reads mapped to contig	21,238	4523	14,997	87,349	52,209	52,222	26,784	53,976	30,125	25,306	21,366
UFS-NGS-MRC-DPRU13541	Genotype	G1	P[8]	I1	R1	C1	M1	A1	N2	T1	E1	H1
	Contig length	1063	2359	1352	3301	2729	2591	1567	1059	1074	750	663
	Reads mapped to contig	33,485	10,936	62,838	108,961	79,014	134,489	80,109	33,007	36,184	34,457	12,638
UFS-NGS-MRC-DPRU4749	Genotype	G2	P[8]	I2	R2	C2	M2	A2	N2	T2	E2	H2
	Contig length	1062	2360	1356	3302	2684	2591	1569	1059	1066	750	815
	Reads mapped to contig	1445	4513	2302	6738	4388	5214	2315	1063	1268	916	471
UFS-NGS-MRC-DPRU13327	Genotype	G2	P[4]	I2	R2	C2	M2	A2	N1	T2	E2	H2
	Contig length	1062	2359	1354	3298	2684	2591	1566	1059	1066	751	798
	Reads mapped to contig	24,446	51,762	23,311	67,839	53,795	60,905	25,147	11,048	20,338	13,618	13,618

The Wa-like genogroup is represented in green, while the DS-1-like genogroup is represented in red.