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. 2021 Aug 26;13(9):1692. doi: 10.3390/v13091692

Table 1.

Overview of included studies.

Author (Year of Publication) Country [Study] Study Period OPSCC Patients. Total/HPV+ Sample Method of Testing Reference True Positive False Positive False Negative True Negative Results
Henley-Smith et al. (2020) London [21] 2005–2016 100/38 FFPE RNA ISH p16 IHC, staining >70% and DNA ISH 38 18 0 44 NR. The 18 false positive cases were p16+/HPV-
Shengming et al. (2020) China [22] 2014–2019 257/47 FFPE p16 IHC staining >70%
DNA PCR
RNA ISH p16: 44
DNA PCR: 47
p16/DNA PCR: 44
p16: 22
DNA PCR: 4
p16/DNA PCR: 4
p16: 3
DNA PCR: 0
p16/DNA PCR: 3
p16: 188
DNA PCR: 206
p16/DNA PCR: 206
p16 ISH: Sen: 93.6%; Spe: 89.10%
DNA PCR: Sen: 97.9%; Spe: 97.6%
p16 and DNA PCR: Sen: 91.7%; Spe: 98.1%
Mes et al. (2019) Netherlands [23] 2008–2011 80/20 FFPE DNA RT-PCR HPV16 E6 mRNA RT-PCR 19 0 1 55 NR
Randén-Brady et al. (2019) Finland [24] Study I: 2000–2009
Study 2: 2012–2016
Study 1: 202/NR
Study 2: 155/NR
Study 1 + 2: HPV positive: 226
FFPE Study 1: DNA ISH
Study 2: DNA PCR
Study 1 + 2: results combined: E6/E7 mRNA ISH
p16 IHC, staining >70% mRNA: 211
DNA ISH: 101
DNA PCR: 91
mRNA: 10
DNA ISH: 4
HPV PCR: 5
mRNA: 15
DNA ISH: 16
HPV PCR: 18
mRNA: 121
DNA ISH: 81
HPV PCR: 41
mRNA ISH: Sen: 93.4%; Spe: 92.4% DNA ISH: Sen: 86.3%; Spe: 95.3% DNA PCR: Sen: 83.5%; Spe: 89.1%
Craig et al. (2019) Ireland [25] 2000–2011 221/90 FFPE RNA-ISH
DNA-ISH
DNA-PCR
p16 IHC, staining >70% DNA PCR: 71
DNA ISH: 67
RNA ISH:80
DNA PCR: 43
DNA ISH: 0
RNA ISH: 0
DNA PCR: 19
DNA ISH: 23
RNA ISH:10
DNA PCR: 88
DNA ISH: 131
RNA ISH: 131
DNA PCR: Sen: 79% (95% CI: 69–87); Spe: 67% (95% CI: 58–75) DNA ISH: Sen: 74% (95% CI: 64–83); Spe: 100% (95% CI: 87–100)
RNA ISH: Sen: 88% (95% CI: 80–94); Spe: 100% (95% CI: 96–100)
Mena et al. (2018) Spain [26] 1990–2013 788/80 FFPE DNA PCR
p16 IHC, staining >70%
E6 mRNA RT-PCR DNA PCR/p16: 58
p16: 58
DNA PCR/p16: 0
p16: 28
DNA PCR/p16: 9
p16: 9
DNA PCR/p16: 721
p16: 691
DNA PCR/p16: Sen: 86.6% (95% CI 76.0–93.7); Spe: 100.0% (95% CI 99.5–100.0).
p16: Sen: 86.6% (95% CI 76.0–93.7); Spe: 96.1% (95% CI 94.4–97.4)
Meng et al. (2018) China [27] 2000–2016 1470/81 FFPE DNA PCR p16 IHC, staining >80% 78 0 3 1389 Sen: 100%
Spe: 96%
Augustin et al. (2018) France [28] 2011–2013 126/56 FFPE p16 IHC, staining >70%
DNA-ISH
RNA-ISH
DNA PCR p16: 46
DNA ISH: 41
RNA ISH:49
p16: 7
DNA ISH: 2
RNA ISH: 2
p16: 10
DNA ISH: 15
RNA ISH: 7
p16: 68
DNA ISH: 63
RNA ISH: 68
p16: Sen: 82% (95% CI 70–91); Spe: 90% (95% CI 80–96)
DNA ISH: Sen: 73% (95% CI 60–84); Spe: 97% (95% CI 90–100) RNA ISH: Sen: 88% (95% CI 76–95); Spe: 97% (95% CI 90–100) p16 and DNA ISH: Sen: 88% (95% CI 76–95); Spe: 97% (95% CI 90–100)
p16 and RNA ISH: Sen: 95% (95% CI 85–99); Spe: 100% (95% CI 92–100)
Mendez-Pena et al. (2017) Boston, USA [29] 2015–2016 57/26 FFPE RNA ISH
DNA ISH
p16 IHC, staining >50%
DNA PCR RNA ISH: 26
DNA ISH: 23
p16: 24
RNA ISH: 4
DNA ISH: 8
p16: 13
RNA ISH: 0
DNA ISH: 3
p16: 1
RNA ISH: 27
DNA ISH: 23
p16: 16
RNA ISH: Sen: 100%; Spe: 87%
DNA ISH: Sen: 88%; Spe: 74%
p16: Sen: 96%; Spe: 55%
Wright et al. (2020) Tennessee, USA [30] NR 20/19 FNA DNA RT-PCR p16 IHC, staining >70% 19 0 0 1 Sen: 100%; Spe: 100%
Menegaldo et al. (2020) Italy [31] 2016–2019 29/16 FNA HPV16 and HPV18 E6 oncoproteins, lateral flow immunochromatographic strip test p16 IHC, staining >70% combined with DNA PCR and/or E6 seropositivity 15 0 1 11 Sen: 94% (95% CI: 70–100); Spe: 100% (95% CI: 72–100)
Channir (2016) Denmark [32] 2002–2016 71/71
(HPV- group: 47/7 with OSCC, 20 Warthin’s tumour, 20 branchial cleft cyst)
FNA DNA PCR
p16 IHC, staining <75%
DNA PCR 68 0 3 47 Sen: NR. Spe: 100% (95% CI 92.5–100.0)
Sivars et al. (2016) Sweden [33] 2013–2016 16/13 FNA DNA multiplex assay p16 IHC, staining >70% 13 0 0 3 Sen: 100%; Spe: 100%
Chernesky et al. (2018) Canada [34] NR 59/48 Saliva and oral swabs (BOT and tonsillar area) pooled and FNA (1) OncoE6 proteins–lateral flow strip
(2) HPV E6/E7 mRNA assay
(3) DNA PCR
p16 IHC, staining >70% Oral sample:
(1) 3
(2) 22
(3) 35
FNA:
(1) 38
(2) 46
(3) 42
Oral sample:
(1) 0
(2) 0
(3) 1
FNA:
(1) 1
(2) 1
(3) 2
Oral sample:
(1) 45
(2) 26
(3) 11
FNA:
(1) 10
(2) 2
(3) 2
Oral sample:
(1) 11
(2) 11
(3) 10
FNA:
(1) 10
(2) 10
(3) 9
NR
Borena et al. (2020) Austria [35] 2018–2020 50/23 Cytology brush tests of tumour surface E7 antigen test, ELISA p16 IHC, staining >66% and DNA PCR 14 9 9 18 Sen: 60.9% (95% CI 38.5–80.3); Spe: 66.7% (95% CI 46–83.5)
Martin-Gomez et al. (2019) Florida, USA [36] 2014–2017 171/157 Oral rinse DNA PCR p16 IHC, staining >70% and DNA PCR 119 7 38 7 Sen: 75.8%;
Spe: 50.0%
Fakhry et al. (2019) Ohio and Baltimore USA [37] 2011–2016 217/187 Oral rinse DNA PCR mRNA E6 or E7 or p16 IHC/combined with DNA ISH 161 5 26 25 NR
Qureishi et al. (2018) United Kingdom [38] 2015–2016 46/36 Oral rinse DNA PCR p16 IHC, staining >70% and DNA ISH.
Positive if: p16+/no HPV DNA test, p16+/HPV DNA+ or p16- and HPV DNA+.
p16/HPV: 26 p16/HPV: 1 p16/HPV: 10 p16/HPV: 9 Oral rinse vs. p16: Sen: 73.5% (95% CI 55.6–87.1); Spe: 83.3% (95% CI 51.6–97.9).
Oral rinse vs. DNA ISH: Sen: 66.7% (95% CI 43–85.4); Spe: 87.5% (95% CI 47.4–99.7).
Oral rinse vs. p16/HPV: Sen: 72.2 (95% CI 54.8–85.8); Spe: 90 (95% CI 55.5–99.8)
Reder et al. (2020) Germany [39] 2014–2017 48/28 Plasma E6 and E7 oncogenes RT-PCR HPV16-DNA RT-PCR 23 0 7 20 Sen: 77%; Spe: 100%
Economopoulou et al. (2019) Ohio, USA [40] NR 22/14 Blood (CtC) HPV16 E6/E7 mRNA qPCR p16 IHC, staining > 70% and HPV DNA qPCR 3 0 11 (7 HPV16) 8 NR
Chera et al. (2019) North Carolina, USA [41] 2016 –2018 103/103.
155 controls (55 healty controls and 60 non-HPV malignancies (not OPSCC))
Plasma DNA, ddPCR p16 IHC, staining > 70% 84 Control: 3 19 Control: 112 Sen: 89%; Spe: 97%
Ren et al. (2019) China [42] 2007–2017 783/611 Plasma HPV16 E6 antibody advanced multiplex analysis/ELISA p16 IHC, staining >70% 545 8 66 164 Sen: 89% (95%CI 86–92); Spe: 95% (95%CI 91–98)
Damerla et al. New York, USA (2019) [43] NR 97/97.
(HPV- group: 7 HPV- HNC and 20 healthy controls)
Plasma HPV16 and HPV33 ddPCR p16 IHC, staining >70% or DNA ISH, or RNA ISH 90 0 7 27 Sen: 92.8%; Spe: 100%
Hanna et al. (2018) Boston, USA [44] 2017–2018 17/15 Blood (Obtained at any time during treatment) DNA ddPCR p16 IHC, staining >70% and DNA ISH or PCR 14 1 1 1 Sen: 93.3% (95%CI 68.0–99.8); Spe: 50% (95%CI 1.3–98.7)
Kuhs et al. (2017) Pittsburgh, USA [45] 2003–2013 112/87 Serum HPV16 E6 multiplex serology p16 IHC, staining >70% and DNA ISH 78 1 9 24 Sen: 89.7% (95%CI, 81.3–95.2); Spe: 96.0% (95% CI, 79.6–99.9)
Holzinger et al. (2017) Germany and Italy [46] NR 120/66 Serum HPV16 E6 antibody ELISA HPV16 DNA, RT-PCR 63 1 3 53 Sen: 96% (95%CI 88–98); Spe: 98% (95%CI 90–100)
Mazurek et al. (2016) Poland [47] 2011–2013 51/29 Plasma HPV16 DNA, RT-PCR HPV16 DNA qPCR 21 0 8 22 Sen: 72%; Spe: 100%.

Abbreviation: Oropharyngeal squamous cell carcinoma (OPSCC); Human Papillomavirus (HPV); 95% confidence intervals (95% CI); Immunohistochemistry (IHC); In situ hybridization (ISH); Droplet-based digital PCR (ddPCR); Reverse transcriptase polymerase chain reaction (RT-PCR); Not reported (NR); Sensitivity (sen); Specificity (SPE); Unstimulated whole mouth saliva (UWMS); Formalin-fixed paraffin-embedded (FFPE); Fine needle aspiration (FNA); Base of tongue (BOT); Circulating tumour cells (CtC).